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Information for unigene UN19236

FASTA Sequence
Unigene ID: UN19236Length: 1432 SSR 
GGATAGCCAAAGCCAAAGACAAAGCCTCTCTCTCAATCCTCAAACCCCTTTTGCTTTACGTTCTTCTCTCTTCCAAATTCGATTCC
TTTTTAGTCTCACGAGGGGGTGGGGTCCCTGCTTGATCTTCAATCAAATCTATCTATCTATCAAAGATATTCTTTTTATTTTTCCG
ATCTGCCCCCATCGGGATCGCCTCCTCAGTCATCTGGTTTGGTCATAAAACATTGTAGAGATCTTTAAACTGGTCAAAAAAAAAAG
AAGATGGATGACAACAATGGAGTTTCAAGCTCACTTCCACCATTCCTCACCAAAACATACGAAATGGTAGATGATTCCTCTTCTGA
CTCAGTCATATCCTGGAGCGACCACAACAAAAGCTTCATCGTCAAGAACCCCGCCGAGTTTTCAAAAGACCTCCTCCCAAGGTTCT
TCAAACACAAGAACTTCTCCAGCTTCATCCGTCAGCTCGACACATACGGCTTCAGAAAAATCGATCCGGAGAAATGGGAGTTTGCA
AACGAGGACTTTGTCAGAGGCCAGCCTTACCTAATGAAGAACATCCACAGGCGAAAACCTGTCCACAGCCACTCGTTACAGAACCT
ACAAGCGCAGAGTCCTTTGTCCGATTCAGAAAGACAGAGCATGGAGGATCAGATCGAGAGGCTGAAGAGGGAGAAAGATGTCCTTC
TCGCGGATTTACAGAGCCAAGAGCTCGAGCGTAAAGGGTTCGAGCTGCAAGTCACAGCGCTGAGAGATCGGTTGCAGCATATGGAG
CAGCGTCAGAGATCTATAGTGACGTTCGTTTCGCAGGTTTTGGAGAAACCGGGGCTTTCTCTAAACCTCGAAACCCACGAGAGAAG
GAAAAGAAAGCTGCAAGAGACGACTTCTTCTCTGCTTCCGAGCAGGTCGCATGCTGAGCAGGTGGAGAAGTTAGAGTCTTCTTTAA
CGTTCTTGGAGAATCTTGCCATGGAATCGTGTGATAAGAGTATGGATATCGATGTGAACGAGTCAACTAGCTTTGCGGAGAGTCTA
AGTAATGGAAATGATAACCGAGCCAAGTCAACAAAGATTGATATGAACGTAGAGCCTGTTACTACCATTGCTGCTGCTGCTGCTCC
AAAGACAGGGGTTAACGATGTGTTTTGGGAGCAGTGTTTGACAGAGAATCCGGGATCGATTGAACAGCAGGAAGTTCAGTCAGAGA
GAAGAGATGTTGATGCAAATAAGATTGGAGATGGAAGGACGTTTTGGTGGAATGCTAAGAATGTAAATGATATTGCAGAGAGAGTT
TGACTTTGATATTTGAAGCTCTTTGTAAAATAGATTTTTTTTTTCGATACTTCTGGAGACAACCATTGACTTGTGGTTCATTGTTT
ACTCTGTTTATTGTTTTGAGACGAGAGCAATATAAATAGATGCATATTGGCTCTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34615 unnamed protein product [Thellungiella halophila]14153e-154
XP_002865228 AT-HSFA4C [Arabidopsis lyrata subsp. lyrata]13195e-143
NP_199383 heat stress transcription factor A-4c [Arabidopsis thaliana]13123e-142
NP_974891 heat stress transcription factor A-4c [Arabidopsis thaliana]8446e-088
CBI30730 unnamed protein product [Vitis vinifera]8421e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9FK72 Heat stress transcription factor A-4c13121e-143
O49403 Heat stress transcription factor A-4a7771e-081
Q94J16 Heat stress transcription factor A-4b5791e-058
Q93VB5 Heat stress transcription factor A-4d5791e-058
Q84T61 Heat stress transcription factor A-15092e-050

TrEMBL top hits (Blast detail)Scoree value
Q3E8G3 Uncharacterized protein At5g45710.28444e-088
B9S8F1 Heat shock factor protein, putative7584e-078
B9H2D8 Predicted protein7575e-078
B9I1G8 Predicted protein7522e-077
Q940V6 Heat shock transcription factor7092e-072

Arabidopsis top hits (Blast detail)Scoree value
AT5G45710.1 RHA1 (ROOT HANDEDNESS 1); DNA binding / transcription factor13121e-144
AT5G45710.2 RHA1 (ROOT HANDEDNESS 1); DNA binding / transcription factor8442e-090
AT4G18880.1 AT-HSFA4A; DNA binding / transcription factor7771e-082
AT4G13980.1 AT-HSFA5; DNA binding / transcription factor4859e-049
AT5G16820.1 HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor4633e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  14%
 
92  29%
 
64  57%

Unigene MembersMember information