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Information for unigene UN19237
| FASTA Sequence |
| Unigene ID: UN19237 | Length: 1037 |
| SNP | GGGAGTGACTCAGGGCCACGCAATCATGTGACGTCACCCGAATCTCTCTTAACCCGCCGTCGAAATGCTTATCCACACGAACGAGC
AGCCACTACTATTCGAGCCTCCGCCCGCCGGATTACAAATCGCCGATCGTCTAGAGTACAGTTTTACTCGTAGATGTCGTCGTCGC
CGCCGTTGGTGAAGTCTTATCTCTTCGCTTACAATTTTCTCCAAGCTTCGTCATGGACGATTTCGCTTCTGAGTATCATTAGCAGC
GTTTTGTCGAACAAGACGATCAGTGGCGGTTACGCTGCCGCTGGATATTTGATAAGTGTGATGCAAACTGTTGCAGTTCTTGAAGT
TCTTCACGGAGCCATAGGAATTGTGCCGAGCGGTTTCTTATCTCCTTTGATGCAATGGAGTGGAAGAACACATTTCATATTAGCCA
TTGTTGGACAGATCAATGAGGTCCAGGATTCGCCATGGCTGGCAATGACACTAGTAGCTTGGTGTATCGGGGAGATGATCAGATAT
CCTCACTATGCTTTAACTTGCCTTGGTAAATGTCCCTATTGGCTAACCTATCTCAGGTACACTGGATTCATCATGATCTATCCAAC
GGGACTAGTGGGTGAATTATTAGTCATGTACAAAGCGCTTCCACATGTTAAAGAAAGGAACCTTTATGCGAATTTCTTCTCTGTTT
TCCCCTTCAGTTACTACGATTTCCTTTGGGCCGTCCTCTTGGTATACCCGTTCCTTTGGTTGAAGCTTTATCTCCAGCTGTTCAGA
CAAAGAAAGTCTAAGCTTGGAAAAGCAGAGAAGCATGAGGGCAAGAGAAAGAGAATGTGAAACTCCCTTCAAGGCTTCAATCATCT
CCTCAGATATGTCTATCTTTATCCTTGTTTATGTTATCGCTCTATGTGCTTTTAGTTTTTTATTCCTTTTACAAAAAGTTTAAATA
ATTTAATTGTGGTTTGTTCGACAATAATTTAGTTATGGTTTGAATAATTTAATCATGCCATATTATCAATTTGTCCTATTTCCTTT
TTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAC43694 unknown protein [Arabidopsis thaliana] | 1024 | 5e-109 |
| XP_002866347 hypothetical protein ARALYDRAFT_358193 [Arabidopsis lyrata subsp. lyrata] | 1021 | 1e-108 |
| NP_200785 Protein-tyrosine phosphatase-like, PTPLA [Arabidopsis thaliana] | 944 | 9e-100 |
| XP_002298376 predicted protein [Populus trichocarpa] | 703 | 8e-072 |
| ACU16724 unknown [Glycine max] | 664 | 3e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2KIP8 Protein-tyrosine phosphatase-like member B | 356 | 6e-033 |
| Q6Y1H2 Protein-tyrosine phosphatase-like member B | 353 | 1e-032 |
| Q5RBK3 Protein-tyrosine phosphatase-like member B | 353 | 1e-032 |
| Q9D3B1 Protein-tyrosine phosphatase-like member B | 349 | 4e-032 |
| Q4W1W1 Protein-tyrosine phosphatase-like member A | 316 | 3e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GW27 At5g59770 | 1024 | 3e-109 |
| B9GES5 Predicted protein | 703 | 5e-072 |
| C6T4V3 Putative uncharacterized protein | 664 | 2e-067 |
| C5YZA4 Putative uncharacterized protein Sb09g022630 | 595 | 2e-059 |
| Q0DHK0 Os05g0460800 protein | 593 | 3e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G59770.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase (TAIR:AT5G10480.2); Has 525 Blast hits to 525 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | 945 | 3e-102 |
| AT5G10480.1 PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | 263 | 3e-023 |
| AT5G10480.2 PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | 243 | 7e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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