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Information for unigene UN19240

FASTA Sequence
Unigene ID: UN19240Length: 917 SSR 
GGATACACACGCAAAAAAAAAATCCCCAACTGCTCTCGTCATCTTGCTTCACCCATCTCTCTCTCTCTCAATGAGTGCTAAAGTAC
TCCGTACAACTATCGGAATTATTGGCAATGTTTTATCCTTACTCATCTCCCTCTCACACACGCCAAAATTTATACAAATTTACAAG
AAGAAATCAGTGGATGAGGATTTTCAACAATATCGTCATGTAGCGATGGTGGTGAAATGTAGCTTGTGGGTTTTGTATGGCCTCCC
ACTTGTTCAAAAGGATGGCATTCTCGTCACCACCAGTAATGGCGTCGGGCTTGTAGTCGAAGTGATCTACTTGGTTGTAATTCTTA
TCTACTGTGACAAAGAATCAGAACGTATGAAAGACACTGGGGGATTTCTTGTCGTTGCGATTGTTTTGCTCTTTGTGTTCGATGTG
GGTACTCTTTGGTTCCTTGAAAGTTTATCGGCAAGACGCGAAGCAATCGGTGTTGTTTGCACCGTTTACACCATTATTATGCATGT
TTCACTTACCCTGGACAATGGGGAGCAGTATCGCTGTAGGTATATGCCCTCTGCTTTGTTCTCATTTGTTAGCTTCATCAACGCTG
GAATTTGGATTGCATATTCTATGATTGACAAGATTGACATCTACGTTCTTGTAATCAATGTTCTTGGAGCATTGGCGAGTGCTAAT
CAATTAATACTCATGTGTTTCTCAACTTGTCCATGCTTGTTACTGCCTAAGAAAATCCTACCAAGTGCCAACGGCATCGTTGTATG
AAGTTTCTGCATCACTACGTACATGCTTCTATCTATATATATCTGTAGGGTTTTTTTAATAAAATATTTCGCTTGACTAATCTAAA
TAATGTGGTTTAATAAAAGTGGAGTATCTATTCTTCTAAATAGAGTATTGTTTGCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002862662 hypothetical protein ARALYDRAFT_920411 [Arabidopsis lyrata subsp. lyrata]4473e-042
XP_002882471 hypothetical protein ARALYDRAFT_896768 [Arabidopsis lyrata subsp. lyrata]4312e-040
XP_002884604 hypothetical protein ARALYDRAFT_896809 [Arabidopsis lyrata subsp. lyrata]4106e-038
NP_568579 protein RUPTURED POLLEN GRAIN 1 [Arabidopsis thaliana]4017e-037
NP_001031986 protein RUPTURED POLLEN GRAIN 1 [Arabidopsis thaliana]3864e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14013e-038

TrEMBL top hits (Blast detail)Scoree value
Q8LD36 Contains similarity to nodulin MtN3 protein3522e-031
Q944M5 At3g28008/At3g280083495e-031
B9GI71 Predicted protein3414e-030
B9RUU5 Putative uncharacterized protein3397e-030
B9GXT7 Predicted protein3343e-029

Arabidopsis top hits (Blast detail)Scoree value
AT5G40260.1 nodulin MtN3 family protein4013e-039
AT5G40260.2 nodulin MtN3 family protein3861e-037
AT3G28007.1 nodulin MtN3 family protein3493e-033
AT4G10850.1 nodulin MtN3 family protein3181e-029
AT5G62850.1 AtVEX1 (VEGETATIVE CELL EXPRESSED1)3181e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  20%
 
114  80%

Unigene MembersMember information