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Information for unigene UN19247

FASTA Sequence
Unigene ID: UN19247Length: 616  SNP
GGATATTTAAAGGTTAAAATTTTATTTTCGTTGCTTCGTTCATCGCCGTCGTCGTTGTCGTCTCACAGAAGAATAAGAAGAAACAA
AGAGAGAGGTTGAAAACATGGCTTATGCAGCGATGAAGCCCACCAAGGCTGGTTTGGAAGAGCCACTCGAGCAGATTCACAAGATC
AGGATCACTCTCTCCTCCAAGAACGTCAAGAACCTCGAGAAAGTGTGTGCTGATTTGGTACGAGGAGCAAAGGACAAGAGACTCAG
AACAAAAGGACCAGTGAGGATGCCCACCAAGGTTCTTAAGATCACTACCCGTAAAGCTCCTTGTGGTGAAGGAACTAACACGTGGG
ACAGGTTTGAGTTGAGGGTTCACAAGCGAGTGATTGATCTTTTCAGCTCTCCTGATGTGGTGAAGCAAATCACTTCCATCACCATT
GAACCTGGTGTTGAGGTCGAAGTCACCATCGCCGACTCTTAGATTTTTTTTTTTTACTTTTTCTGCAAGAAACAGTCTCAACAGTC
TCTTACACTTCATTTGGAGTAGACCAATGTTTTGTTGTCGTGAAACTTAGTTCCTGTGCTTTCTTAGTTGAGGAGATTTTGTTTTA
TTCCAGTCTTTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877555 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]6003e-060
NP_190321 40S ribosomal protein S20-2 [Arabidopsis thaliana]5941e-059
NP_201036 40S ribosomal protein S20-1 [Arabidopsis thaliana]5886e-059
XP_002265347 PREDICTED: hypothetical protein [Vitis vinifera]5886e-059
XP_002866482 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]5851e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9STY6 40S ribosomal protein S20-25946e-061
P49200 40S ribosomal protein S20-15883e-060
P35686 40S ribosomal protein S204801e-047
Q3ZBH8 40S ribosomal protein S204388e-043
P60866 40S ribosomal protein S204388e-043

TrEMBL top hits (Blast detail)Scoree value
A5AJ83 Putative uncharacterized protein5884e-059
C6TFE6 Putative uncharacterized protein5841e-058
Q8H189 40S ribosomal protein S205795e-058
B9R9P7 40S ribosomal protein S20, putative5761e-057
C6SY25 Putative uncharacterized protein5732e-057

Arabidopsis top hits (Blast detail)Scoree value
AT3G47370.2 40S ribosomal protein S20 (RPS20B)5955e-062
AT3G47370.1 40S ribosomal protein S20 (RPS20B)5955e-062
AT3G47370.3 40S ribosomal protein S20 (RPS20B)5955e-062
AT3G45030.1 40S ribosomal protein S20 (RPS20A)5892e-061
AT5G62300.1 40S ribosomal protein S20 (RPS20C)5892e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  27%
 
63  27%
 
112  18%
 
73  27%

Unigene MembersMember information