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Information for unigene UN19258

FASTA Sequence
Unigene ID: UN19258Length: 971 SSR 
GGGTGTTTACCTGAAATCCATTTATGTGTGTATAGTCGACAAATCTCAAACTAAGTAGATGTGTGAAAATATGTACATTAGAACAG
AAGTATACACATAAGAGTACAAATTGATAACAATCACATGAAAACATAATAAAAGATACTAAATGCAAGAATCAAGAAGAAGTAAT
CTTAGAGCTTAAGTGATAAGTCTAGCTTTTGTTGCTCTTCCTGATTAGTGCTTAACAGTACTCCTCCTTGCCATTGTTCAAGAGGC
GGCGACCCTACTAGAATCCTTCCTATGTTGCTTGATGATCTAGCCATGTCATTGGACCGTGAATTTACTGAAGAATCCATCATCAT
CATCATGTGATGCTGATGCTGATGATGATGAAAATTATCCATTGAAGAAAGTTTACCTATAGCTGGTTGTTGGTCAAGAGGTTGTC
TTGACCAGTTGACATGACCGTAGTGACCACCGAACATGTTATACGAACTTAGCTTGTGGCTCATCGAATGCGCTTGAATCCCCAAA
GACCTGTTGTTGTATTGTCCATGGAAAGGAACTGGAGAGAAACCGTAAGGATGTCCAAAAGCTGAGGCTGATGCTGCCATACGTTG
CCCTCTTTTTGCCAACGTCCTCTCTCTCTTGTGTGCGTTTTGGTGACCACCAAGTGCTTGTGAGCTATAGAAAGTTCTTTGACAGT
AGTTGCATGAGAAAAGCTTTTGTTCCGTGGATGTAGTCGATCCGTTATAACTCTGGCTATCTATGCAGTCGATGAGATTGAGTTCT
TGACTAGAATCGTTAGCGTCTGCTTCTTCATCTTTGAAACTCTGTTCTGGGCTCTTGTTTAGAGAATCTTGACATGGAAAAGCTGT
AGATGAGGAAGCTATGCAAGAGGTATCTGAAGGAAGTTGTTTGTCCCTCGAAGTGTCCATGTGAGCTGAAGAGGGAACAATATTTT
TGTAAGTGATCCATTTCTTCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197898 zinc finger protein 3 [Arabidopsis thaliana]9053e-095
XP_002872142 hypothetical protein ARALYDRAFT_910560 [Arabidopsis lyrata subsp. lyrata]8669e-091
XP_002871446 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6392e-064
NP_196658 C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]6312e-063
XP_002527314 zinc finger protein, putative [Ricinus communis]3936e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q39262 Zinc finger protein 39051e-096
Q42485 Zinc finger protein 13011e-026
Q39261 Zinc finger protein 21962e-014
Q39266 Zinc finger protein 71943e-014
Q39263 Zinc finger protein 41882e-013

TrEMBL top hits (Blast detail)Scoree value
Q0WT56 ZFP3 zinc finger protein9052e-095
Q9LEU3 Putative uncharacterized protein At5g109706311e-063
B9SMU5 Zinc finger protein, putative3934e-036
A5BQW1 Putative uncharacterized protein3836e-035
B9GMC4 Predicted protein (Fragment)3631e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G25160.1 ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding9068e-098
AT5G10970.1 zinc finger (C2H2 type) family protein6352e-066
AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding3011e-027
AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding1962e-015
AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding1943e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  50%
 
94  50%

Unigene MembersMember information