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Information for unigene UN19273

FASTA Sequence
Unigene ID: UN19273Length: 1287 SSR 
GGACATTCGTGTACCGTTTCCTTCTTTTATTCTCTCTCTTTCTCTCTTTATGAGAAAGATTGTTTCTTTTGATCTGTGAAGAGATC
AAGCTGTTTCGTGTGTCTTTAGAAGAATCTAAAAGTTGAAACCTTTTTTGATCGTTTGGTTTATGGTTTTGATCGGTGATTTGAAT
TTGAATTCCAGTTTATAATTGTTCTTTTGTTGATTGATTTTGGAAACGATGAGTGGTTTCCGAGATGTTTGTTCATCAAGTGGGTC
GGTGAATGTGATGATCGGAGTATCACCGGCTGAAGAAGGAGACGACAACGCCGCCGCCGCCGCCGCCATATCGTCGGAGGATTCGT
CTTCCCCCGACGAGACGGTGGCGGGAACAGAGCTCGACTTAGCTCTGGGTCTTAGCGTTGGTAGGAATCACTCAAAGGTTCGGTCT
TTTTCTTCGTCTTTGGCTTCCTCCCCTTCTTCTTCTTCTCTGACCAGAGAAAGTGGAACGAAACGGTCTGCTGATTCTTCTGCGGC
TGCCTCAAAAGGAAACGTTGCGGTAGGGTGGCCGCCTCTACGGACTTACAGGATCAACAGTTTGGTCAACCAATCAAAGTCCTCGC
CCGCTGAAGACGACATTCAAAAGGACACAACAAAAAGCGGCGTGAAGAACAATGACGCTTGCTTCGTCAAGTGTCCCATGCTTGTG
AAGGTTACAATGGACGGAGTTATAATTGGAAGGAAGATTCATCTGAATGCTCTTGATTCTTATGAAGCCTTGGCGAAGACTCTGGA
ACAAATGTTTTTCAACACGCCTACTTCTGTAACAACAAGATGCAATGAAACAAGACGTGGTTCAGAACTGCTGGATGGTTCATCAG
AATATATCATTACGTATCAAGATAAAGACGGAGATTGGATGCTTGTAGGAGATGTTCCATGGCTGATGTTCCTTGTGTCTGTTAAA
AGACTGAGAATCATGAGAAGATCAAGTGAAACTGGAGTTGGCAAGTAGGGATGGATTCATCTTTTCTGAGAAACCACTCTCTGTTA
ATCAAGCTGAAGGGTGAAATCATCTTCTGTGTAAGATGGAAATGATTGAACGTGGAGATAAAAAAGAGACAAGAAATACATATATA
CTGTTTTACTCGAGAACCAAAGTTTATGGTTAACCTGGTCTGTAAATTGGTAAAATCTTGTTCAGATAATCACACATAGACTGTTT
ATTATGAGTTATACATGTGTCTGCAGTGGTTTGTGAATATCAAACAAAAGTTTCATTAAGAAATATGAAATATTAATCAGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889491 indoleacetic acid-induced protein 10 [Arabidopsis lyrata subsp. lyrata]7487e-077
NP_180889 auxin-responsive protein IAA13 [Arabidopsis thaliana]3992e-036
NP_850205 auxin-responsive protein IAA13 [Arabidopsis thaliana]3964e-036
XP_002881274 indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp. lyrata]3921e-035
NP_171949 auxin-responsive protein IAA12 [Arabidopsis thaliana]3893e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q38828 Auxin-responsive protein IAA107359e-077
Q38829 Auxin-responsive protein IAA114761e-046
Q38831 Auxin-responsive protein IAA133962e-037
Q38830 Auxin-responsive protein IAA123891e-036
A2XB18 Auxin-responsive protein IAA103631e-033

TrEMBL top hits (Blast detail)Scoree value
A8MR39 Uncharacterized protein At4g28640.24762e-045
Q0WU05 Auxin regulated protein3963e-036
C5XVX0 Putative uncharacterized protein Sb04g0372603758e-034
B7EH15 cDNA clone:001-040-C05, full insert sequence3632e-032
B7EWI8 Putative uncharacterized protein3632e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G04100.1 IAA10; transcription factor7366e-078
AT4G28640.1 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor4769e-048
AT4G28640.2 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor4769e-048
AT2G33310.1 IAA13; transcription factor3997e-039
AT2G33310.3 IAA13; transcription factor3997e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
121  33%

Unigene MembersMember information