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Information for unigene UN19276

FASTA Sequence
Unigene ID: UN19276Length: 1007 SSR 
CGCAACTTATATATGGTCTGATCATCAAAAAAAGAGAAGTTACATTTAGTTCTGATCTGAGTTAACATTTACACACTGAACTCATG
GAGAGAGACACACCAGGATCAGTTTTACAGATTTGGTGACAAAGTTCATAATGAAGCAAGTAAACTCTAGAACGTATAGTATTTGA
GTAAGATGACGTATTATCCACTTCTACTGCGTCAGTGAGGCGATCCGGATCAGTAATTTGGCGTATTAATCCAAACGCGCCAAGCC
ATGGTCTGGTATAAGCTTCACGTTTGAGCCGTATTTTCATCTCCTTGAGGTGAATTGCTGCTACTAGGCTTATCATTTCCACCATA
CCTCTTTTTTCCAAAATCGAAAGGAACATATCTGTACTTGATCATGTGCACGATCTGTCGTTTCATAGTGAGAAAATACAGAAACA
ACCAGTAGCAAAGCAAGATTGGCCAGAACACAGGCACATCCAAAAACGAGAAGAAGGTCATCACAAACGCTACAACGAAAGCTTTA
GTAGCTGCATACCAGAACTTGAACTCAGGAAGACGACGAACAAAAGGCTTGAACTCATCAGAATCTTTACTAGTCTCAGAAGAAGC
AGAAGCATGATCCAAGGCTTCGAGCTCTGGATCGACTTTGGGGGAGAGGAAACCGATCAAGAGGTTTAAGATGTACGTCGCGAGAC
CATACGAGACGACGAAGAATCCGTAAGCGTAGTAAACTCTGTAGATGTAGATCACCGCGGCGATTAGCGTCACTAGCCATCTTCGA
ACGAGGTGTGGAGCCGATTTGTCGAGGTGACTCTGGAAAGATTTCGAGAATTCGATTCTCCATCGAGCAAGCGGTGAATCGCTCAT
TGTGTATCCGTCTCCTTCGTTTCCTGATTCGTCTTCCATGGTTAAACCCTAATTCAATCACTGATTAAGATCACAATGATCTTCGA
ATCGAACACGTCGTTCTGGAGAGAGAGAGAGAGAGAGAGAGAGTGGTTTACTTGGTTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884121 hypothetical protein ARALYDRAFT_480729 [Arabidopsis lyrata subsp. lyrata]7673e-079
NP_565431 Rer1-like protein [Arabidopsis thaliana]7602e-078
NP_849974 Rer1-like protein [Arabidopsis thaliana]7602e-078
CBI17492 unnamed protein product [Vitis vinifera]7208e-074
XP_002265209 PREDICTED: hypothetical protein [Vitis vinifera]7181e-073

Swiss-Prot top hits (Blast detail)Scoree value
O48671 Protein RER1B5824e-059
O48670 Protein RER1A5815e-059
Q9ZWI7 Protein RER1C5295e-053
A5PJ65 Protein RER14946e-049
Q9CQU3 Protein RER14911e-048

TrEMBL top hits (Blast detail)Scoree value
Q3EBY2 At2g182407601e-078
Q9ZPV7 At2g182407601e-078
B9S6E1 Rer1 protein, putative6865e-070
B9GRM1 Predicted protein6703e-068
B9H4C9 Predicted protein6571e-066

Arabidopsis top hits (Blast detail)Scoree value
AT2G18240.1 RER1 protein, putative7607e-081
AT2G18240.2 RER1 protein, putative7607e-081
AT2G21600.1 ATRER1B5823e-060
AT4G39220.1 ATRER1A5814e-060
AT2G23310.1 ATRER1C15294e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
91  25%
 
101  25%

Unigene MembersMember information