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Information for unigene UN19305
| FASTA Sequence |
| Unigene ID: UN19305 | Length: 1555 |
SSR | | CGTGCCCCCTCCACCTCGTCCGAATCGAAGCTAACGACGGCGACGGTTAACGATATCGGAGGAGCGTGGTGGTGGTGGTGGTGTCT
CTATCTACACATTCGAGGAGAGGAGGTCTTTTTTATAATTTCGAAACAGTTAAAAATCATCGGAATTCACCCAATTCTCTCATCCA
CCACCATCGTGCTTCCCCATGGATTTGTCGCTTCTGTTGCTCCAAGGGGATTAGGGTTTTGATTAGCAATGCCTTTCAAGAAGATA
GTTCGTGAGCTTAGGGGTCGTAACAAAGCCATTGGTAGTAGGCGAGGAAGGTCTCACATTGCGCCTGAAGAATCTTCTTCTTCTTC
TCCGTCGTCTCCGTCTCCATCCACTGATGAATGTTTAGAACAGAGCATTTGGGTTGATTTGCCTCCTGAGTTGCTTCTCGACATCA
TCCATCGGATTGAGTCTGGTCAGACTTTATGGCCTGGGAGGAGAGACGTCGTCGCTTGCGCCTCCGTTTGTAGGTCCTGGAGGGAT
ATGACTAGAGATGATGTTGTTCAAGTTCCTGAGCTCTCTGGTCTCCTCACTTTTCCTGTTTCCTTAAAACAGCCTGGTCCTAGAGA
TGCTCCGATTCAATGCTTTATCAAACGAGAAAGAGCCACCGGGATTTACCGTCTCTATCTCGGTTTAAGCCCTGCTCTTTCTGGCG
AAAAGAGTAAGCTCTTACTGTCGGCTAAGAAAGTCAGGAGGGCGACCGGTATGGAGTTCGTTATATCCTTGTCGGGAAATGACTTC
TCAAGAAGCAGCACTAGTTACATAGGGAAACTAAGATCTAATTTCCTTGGAACTAAGTTCACCGTCTACGAGAACCAACCACCTCC
GGTTTATTCATCGAACCGGAAGCTACCACCATCGATGCGTGTGTCTCCATGGGTATCATCTTCTACTCATAGTTACAACATGGCTT
CGATCTTGTATGAGCTGAATGTCCTCAGAACCAGAGGTCCAAGAAGAATGCAATGTATCATGAACAGCATCCCAGTTTCGTCCATT
CAAGAAGGCGGACAAGTTTATTCTCCGACCGAGTTCACGAACCAAGGAAATAAGAAGAACAAGAAGTCGATGATGGATTTATGCAC
AGGGAACATGGGTGGAGAATCCGTTGTAAAGGAACCATTAGTCCTGAAAAACAAGTCGCCGAGGTGGCACGAGCAGCTCCAGTGCT
GGTGTCTAAACTTCAAAGGACGAGTCACCGTCGCCTCGGTGAAAAACTTCCAGCTAATTGCAGCTGCTGCAGAAGCAGGGAAGAAC
ATGAACATACCAGAGGAGGAGCAAGAGAGAGTGATATTACAGTTTGGGAAGATAGGGAAAGATATTTTCACCATGGATTATCGTTA
CCCGATCTCTGCATTCCAAGCATTTGCCATTTGTTTAAGCAGCTTCGACACGAAGCCTGTCTGCGAATGAATGTAACATATCGAAT
CAAATTCTCTATTTGCAGTTTGTTGTGTGTTTGATGAATGTACATACTTTTCCTTCTTGGAACCAAAAAAAAAATCAAGATCTGTT
TCCTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891342 hypothetical protein ARALYDRAFT_473876 [Arabidopsis lyrata subsp. lyrata] | 1726 | 3e-190 |
| NP_175160 Tubby-like F-box protein 6 [Arabidopsis thaliana] | 1697 | 8e-187 |
| NP_001185159 Tubby-like F-box protein 6 [Arabidopsis thaliana] | 1697 | 8e-187 |
| AAG52638 unknown protein; 3155-1759 [Arabidopsis thaliana] | 1690 | 5e-186 |
| XP_002510406 phosphoric diester hydrolase, putative [Ricinus communis] | 1239 | 1e-133 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0WPY0 Tubby-like F-box protein 6 | 1697 | 3e-188 |
| Q8GVE5 Tubby-like F-box protein 2 | 1066 | 5e-115 |
| Q10LG8 Tubby-like F-box protein 6 | 1040 | 5e-112 |
| Q6NPQ1 Tubby-like F-box protein 11 | 913 | 3e-097 |
| Q944S3 Tubby-like F-box protein 5 | 790 | 5e-083 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R7W3 Phosphoric diester hydrolase, putative | 1239 | 7e-134 |
| B9H4C5 F-box family protein | 1224 | 4e-132 |
| B9GRM5 F-box family protein | 1208 | 3e-130 |
| B9F208 Putative uncharacterized protein | 1062 | 2e-113 |
| C6T8I4 Putative uncharacterized protein | 897 | 3e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G47270.1 AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor | 1704 | 4e-190 |
| AT2G18280.1 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor | 1066 | 4e-116 |
| AT2G18280.2 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor | 1066 | 4e-116 |
| AT5G18680.1 AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor | 914 | 2e-098 |
| AT1G43640.1 AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor | 790 | 4e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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