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Information for unigene UN19307

FASTA Sequence
Unigene ID: UN19307Length: 614 SSRSNP
GGGAGCTTGGGCGAGAGAGAGAGAAGAAGCCATGGTTAAGTTCCTAAAGCAGAACAAAGCGGTGATCCTCCTCCAAGGCCGTTACG
CCGGCAAGAAGGCGGTGATCATCCGCTCCTTCGACGACGGTAACCGCGAGCGACCATACGGACACTGCCTCGTCGCGGGACTGAAG
AAGTACCCGAGCAAGGTGATCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGGGTCAAGTGCTTCATCAAGGTCGTGAA
CTACCAGCATCTGATGCCTACTCGTTACACGCTCGACGTGGATCTGAAGGAGGTGGCGACTCTCGAAGCTCTGTCTTCGAAGGATA
AGAAGGTGGCGGCTCTTAAGGAGGCCAAGGCTAAGCTCGAGGAGAGGTTCAAGACTGGGAAGAACAGGTGGTTCTTCACCAAGCTC
AGGTTTTGAGAAAGTTTTATCGTTTTTGTAACGGAATCTACAGTATGCTTTTTGTAGTTTGTCGGAACATGTTTTGGATGGTTTAA
GACTTATGGTTTGATATTTGATTCTTGGAATTTTTGTTCTTTTATTACGATCATTTGCTATGTTGGTGCTTTAGTTAATATATCTT
CACTGGTTTAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193236 60S ribosomal protein L27-3 [Arabidopsis thaliana]6711e-068
XP_002870267 60S ribosomal protein L27 [Arabidopsis lyrata subsp. lyrata]6576e-067
NP_188862 60S ribosomal protein L27-2 [Arabidopsis thaliana]6461e-065
AAM63601 ribosomal protein L27, putative [Arabidopsis thaliana]6452e-065
XP_002300063 predicted protein [Populus trichocarpa]6083e-061

Swiss-Prot top hits (Blast detail)Scoree value
P51419 60S ribosomal protein L27-36717e-070
Q8LCL3 60S ribosomal protein L27-26466e-067
Q05462 60S ribosomal protein L275911e-060
Q9SKX8 60S ribosomal protein L27-15902e-060
P41101 60S ribosomal protein L275141e-051

TrEMBL top hits (Blast detail)Scoree value
Q0WRB8 60S ribosomal protein L276711e-068
A9P8D7 60S ribosomal protein L276082e-061
A9PAT1 60S ribosomal protein L276064e-061
A8MS28 Uncharacterized protein At4g15000.26011e-060
B7FH51 60S ribosomal protein L276002e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G15000.1 60S ribosomal protein L27 (RPL27C)6725e-071
AT3G22230.1 60S ribosomal protein L27 (RPL27B)6474e-068
AT4G15000.2 60S ribosomal protein L27 (RPL27C)6019e-063
AT2G32220.1 60S ribosomal protein L27 (RPL27A)5911e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  50%
 
92  20%
 
102  20%
 
81  10%

Unigene MembersMember information