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Information for unigene UN19312

FASTA Sequence
Unigene ID: UN19312Length: 1905 SSR 
CACACAAAATATTCAATAAAAACAAGAAAGAGAAAAAAAAAATTATTTCCTTTTTAATTTTTTTTTTGCAATATGGAAAATGGAAG
TCTTACACAACAACGCACCTTCTTTAATAACAGTCTTGACGTGGTAAGTGGGTCCTACAAAAAGACTTCTTACCATTAACAATCGT
GGTCCGAGCACTAGCCTGTTCTAACTTCCAACCCTTCTCTCTCTATCTCCCTCGTCTTCTTCGTCTTCCATAATCATGGCCTCTTG
CGCCACCGGAACAGAGGCGGCGATCAGAGCAGCGGCATGTAGAGACGGAGAAGCAGCGGCCCATCTTAAGCTGGTCTCCATCTTCG
TCATCTTCCTCACAAGCGTTTTCGGAATCTCCGGACCTGTTCTTCTCGCTCGTTACTTCCAAGGGAAGCCCCTCTACGATAAAGCC
GTCCTCGTTATAAAATGCTTCGCCGCCGGCGTGATTCTCTCGACGTCTCTAGTCCACGTCTTGCCGGAGGCGTTCGAGTCTCTCGC
CGATTGCCAGGTGTCGTCTCGGCATCCGTGGAAAGATTTTCCGTTCGCCGGTTTGGTGACGTTGATCGGAGTAGTCACGGCGTTGT
TGGTTGATTTAACGGCGAGTGAACATATGGGACACGGTGGTGGTGGTAGTGGTGGAGGGATGGGGTATGTACCGGTGGGTGAAGCG
GTTGGGGGTTTGGAAATGAAGGAAGGAAAGTTTGGGGCTGATTTGGAAATACAAGAAAGTAGTGAGGAGGAGATTGTGAAGATGAA
ACAGAGATTAGTGTCTCAAGTGCTTGAGATAGGGATTATATTTCATTCAGTGATAATTGGAGTGACCATGGGAATGTCACAGAATC
AGTGTATCATTAGACCTTTAATCGCTGCTCTTTCGTTTCATCAGATTTTCGAAGGCTTGGGCCTTGGCGGTTGCATCGCTCAGGCG
GGGTTTAAGGCAGGGACAGTGGTCTATATGTGCTTGATGTTCGCAGTAACTACACCTCTCGGGATAGTACTTGGGATGATGATTTT
CGCAGCGACCGGTTACGATGACCAGAACCCAAACGCATTGATAATGGAAGGTTTATTAGGATCACTATCCTCAGGGATTTTAATAT
ACATGGCCTTAGTTGACCTAATTGCACTTGATTTCTTCCATAACAAGATGTTGACAACGGCCGGTGAATCAGGTTTTAAGCTGAAG
AAACTTTGTTTTGTGGCATTGGTCTTGGGTTCTGCTTCTATGTCACTTCTTGCTCTCTGGGCTTAAAAGAGGCAAAACTATACAAA
AGTTACCATAGCAAAAATGTTATGTTTCTATATGAATATGGTTTTAACTTTATAATATAATCTATTCCACATATTTAAAGTATATT
TACACATTAAACGTCTATGTTAAACAAGTTAGATCTCTCTACTACTACTACTACTATGTACTGTATTGATCTTCTTATCTTTAGAC
GTAATAAACCATTCCAACTTCAAGCAGAGAAGTATGAGGAACATTAAGCACAACATCAGTTCCTCTGCAGTTGGTGCTCATAAACG
CAAACACAACATTCACAGCTAACTTCTTCAACACGGAAGAAGACTGCTTCGCCTTTGCGTAAGACTGTCCCAATATATACGCTACT
CCTGCTTCTTTCGCCTCCATTATCTCCATTGTCTCTTCCTTTCTCATCCTCAAACTATCGCACCTATCTTCTTCGGTTCCCGGTTC
GGTTTCAACAAACTCAACAATAGCAGACACTAACCGGTTTTCGAAGTCATACATCTCTCTCGGAACGTCTCTGTACCCATACCTAA
CCACACTCCTAAACATCCCATACTCTTTAGGACCGACTCTGCTTATCACAAACCTCTCTTCCTCTCCAACGTACGGAACCTGAACT
GACTTCACGCATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAE30488 zinc transporter ZIP6 [Arabidopsis halleri subsp. halleri]16073e-176
NP_180569 zinc transporter 6 [Arabidopsis thaliana]15931e-174
XP_002881083 zinc transporter ZIP6 [Arabidopsis lyrata subsp. lyrata]15633e-171
XP_002313244 ZIP transporter [Populus trichocarpa]11557e-124
XP_002276231 PREDICTED: hypothetical protein [Vitis vinifera]11522e-123

Swiss-Prot top hits (Blast detail)Scoree value
O64738 Zinc transporter 6, chloroplastic15935e-176
O22397 Potassium transporter 16948e-072
Q38856 Fe(2+) transport protein 15343e-053
O23039 Zinc transporter 55309e-053
O81123 Zinc transporter 15263e-052

TrEMBL top hits (Blast detail)Scoree value
Q70II8 Zinc transporter ZIP616072e-176
B9HND0 ZIP transporter11555e-124
B9GGQ4 ZIP transporter11465e-123
B9RL85 Zinc/iron transporter, putative11125e-119
A5AR22 Putative uncharacterized protein7406e-076

Arabidopsis top hits (Blast detail)Scoree value
AT2G30080.1 ZIP6; cation transmembrane transporter/ metal ion transmembrane transporter15943e-177
AT2G30070.1 ATKT1 (POTASSIUM TRANSPORTER 1); potassium ion transmembrane transporter6956e-073
AT4G19690.2 IRT1 (iron-regulated transporter 1); cadmium ion transmembrane transporter/ copper uptake transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter5362e-054
AT1G05300.1 ZIP5; cation transmembrane transporter/ metal ion transmembrane transporter5343e-054
AT3G12750.1 ZIP1 (ZINC TRANSPORTER 1 PRECURSOR); zinc ion transmembrane transporter5308e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  14%
 
84  57%
 
62  29%

Unigene MembersMember information