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Information for unigene UN19319
| FASTA Sequence |
| Unigene ID: UN19319 | Length: 1049 |
| SNP | GCTTGTCAATGATGTGGAGCAATAATTCAGTGTATTGCAATCCGAGAAAGACCGTTTATTCAATTGTTGGCATTATTTCGTTTTCA
GAAGACAATTCCAAATTAAGAAAAGCGAATAATCGTTATGAAAAATGTGCTTAAAGATACCCATCAAATGGAAGAGAAGGCTGGTT
ATCTTGACCAACACGTCAGGTTATTAACTCAGCGGCTCAAGCTCATGAACTTATCGAGCCAGTCCATGTTTACACTCTTCGGTCTC
TCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGTGAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTA
TTTTGCTTCGGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAACGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCT
CGGTTAGAATAGGAGGCACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAGATGCTTCAAGGCGAATTCT
CTTTGGCATACATATCTTGGATCCGTCTTACGCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTTTTCCA
GACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTCCGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAG
CCAAACCATGGAGTGGTCCAGCTAAACCATTTAGCGCAGCTGCAAATGAAAGATATGGATCTGAGAGGGCACTCCCAACCAAGTGA
CCAGCGTGAGCACTAACATTTCCACCTTCATGATCACTGTGAATGGTGATATAAAGCCTCATGAGCTCTTTCATCTGAGGACTATC
AAATCCCAGCATGTGTGAAAAATTAGCACCATAATCCAAAGAATCGTCTAGTGGAATGATGCTACCGTCTTTAAACATCCTCCGGT
AAACATATGAAGCTACAACAGGAACACGAGCAATCAAGTTGAGGGCATCCTCAAAGGTTGGCTCCCAATACTTTGACTTATGAACA
ACACCCTCCTCATATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876535 hypothetical protein ARALYDRAFT_486475 [Arabidopsis lyrata subsp. lyrata] | 1438 | 5e-157 |
| Q9M1D3 RecName: Full=Citrate synthase 5, mitochondrial; Flags: Precursor | 1428 | 7e-156 |
| NP_191569 citrate synthase 5 [Arabidopsis thaliana] | 1428 | 7e-156 |
| CAA59010 citrate (si)-synthase [Beta vulgaris subsp. vulgaris] | 1325 | 6e-144 |
| XP_002330895 predicted protein [Populus trichocarpa] | 1325 | 6e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M1D3 Citrate synthase 5, mitochondrial | 1428 | 3e-157 |
| P20115 Citrate synthase 4, mitochondrial | 1320 | 1e-144 |
| P49298 Citrate synthase, mitochondrial | 1303 | 9e-143 |
| O80433 Citrate synthase, mitochondrial | 1298 | 4e-142 |
| P83372 Citrate synthase, mitochondrial | 1256 | 3e-137 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N6I9 Citrate synthase | 1325 | 4e-144 |
| Q96544 Citrate synthase (Fragment) | 1325 | 4e-144 |
| C8C9Q8 Citrate synthase | 1318 | 3e-143 |
| Q6T8H1 Citrate synthase | 1313 | 1e-142 |
| O24259 Citrate synthase | 1292 | 3e-140 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G60100.1 CSY5 (citrate synthase 5); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer | 1429 | 2e-158 |
| AT2G44350.1 ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase | 1320 | 9e-146 |
| AT2G44350.2 ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase | 1320 | 9e-146 |
| AT2G42790.1 CSY3 (citrate synthase 3); citrate (SI)-synthase | 231 | 2e-019 |
| AT3G58750.1 CSY2 (citrate synthase 2); citrate (SI)-synthase | 229 | 3e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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