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Information for unigene UN19327

FASTA Sequence
Unigene ID: UN19327Length: 1023  SNP
GCTTAAAAACCAAGATAGTTTCATTTCAATTGATAACAAAGTACACAACAAAACACGAAGAACATAAATGAAGATTACATCACAAG
CATTGACAACTTCATCTTATTACAAACTCATTACACGCCTCTCTTTATTCATAGAGTTTGTTTGATCCATGACAAAACAAGTTATA
GATCATTAAACAGAGACGATGTTGGTCACAGAGACCTTAACCATTTCAGCTTCAAAGATAATAGCATCATTCACCAAATACCCTTT
GGATGCATCGTTTAAATCTGCTAACAATATGATATTGTTTACTCCCACACCATAATCGCTTCGAATAGGGTACCAAGCTGCAGAAT
ATATTTGTCTATGGTTGGTGCTTCGCTGATTCTTTAACCGCAGATTAACCGCTCCCCAAGTGTTTGTAGCGACTGCGTTTGGTCCA
TGGCCTTGAGCAAATAAGAAGATTGGAAGTGCATATGGTCTTCCTCCTCCGTCTCCTTTCGGATTAAACCCTAATCTCCAGTATCT
GTCTCCAACGAGAAAATCGGCAGAATAGTAGAATTTATCTTCCAAGTTGGAGAAATGAAGTATCTTCCAAGTAAACACATTGTCTG
GAGGGTTTGATATGAATGTGACTTTCTCTTGTACCAGGGCCGGTTTAACGATGAGAATTTCTGCACCGAAAGAACAAGTGTCTTGC
ACAATGTATCCTTCGTTGGTGTTCTCGAATGTTGAAAGAGCAATCAATTGTCCGAATCCCCACTCTTTTTTCCCAGCGTTGTATCC
CTTCACCGCTCCATCTGTGACGATCAAGTACTTGTTCAGCTTTGGATTGTGGACAAAGAGTTTGAGATCAACATTGACTTCCCAGC
CACTGGGAAGAGATTCAGTCTCTTCGATTCTCGCGTAAAGGGATATATAGCCAGCTCCACCATCGTTAGCATTACCAACCAGCAGA
AGAGCAAGTGATGAATAGAAAAGCTAGAGAAATGAAAGCTAAACTCTTTTGTTGACTACCCATTTTCTGTGATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872211 hypothetical protein ARALYDRAFT_489472 [Arabidopsis lyrata subsp. lyrata]11482e-123
NP_568484 TRAF-like family protein [Arabidopsis thaliana]11302e-121
AAM61729 unknown [Arabidopsis thaliana]11213e-120
NP_568483 TRAF-like family protein [Arabidopsis thaliana]10999e-118
NP_198002 TRAF-like family protein [Arabidopsis thaliana]10693e-114

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93Z83 AT5g26280/T19G15_13011302e-121
Q8LEX1 Putative uncharacterized protein11212e-120
O81493 F9D12.8 protein10996e-118
O81497 F9D12.5 protein10692e-114
A8MR02 Uncharacterized protein At5g26280.210664e-114

Arabidopsis top hits (Blast detail)Scoree value
AT5G26280.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein11317e-124
AT5G26260.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein11003e-120
AT5G26300.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein10691e-116
AT5G26280.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein10672e-116
AT2G04170.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein10465e-114

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  70%
 
93  30%

Unigene MembersMember information