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Information for unigene UN19332

FASTA Sequence
Unigene ID: UN19332Length: 1702 SSR 
AGTGAGATCAATTTCTAGTACATAGTGAACAAAGAAGTTCACAAACTTAAAACACACTATTTGTAAAATTATAACATTCAATTGGT
AAAGGCAAAATAGAGAGTTACGTACACTATTAAAAAAAAATCAACATCACTAAACCATACATGCAAAATCTTGAGCAAATCATTAC
CTTTCTTCATTTAGACTGTTTCTTTCTCTATTTCTCAATGATTCGGCGAAAATCAATTAACCAAAAAAAAAGTGGAAAATGATCAG
AGGGTAAGAGGATCAACTTCAGAGTTTCTATCCTTCATTGGACTCCACTCTTCTCCCTTTGGCTTTTCGGAGATGACCATAAGCCG
CCGTTGTAATATGGAAGCTACGAAGAGGAAGATTGAGCACATACCAAACATGATCGTGATTGGAAATGCATCAACGTTGTACAAGA
CGATGCAGACAAATATGTTGAGCGGAACACGGAAGAAATTCATTATGGTGCTTCTTGCTTCTTCAGGGATATACTGTGATCTCATC
TTCATGATCGATGGCCAAAAGATTCCAACACAAGCCTCGAAAACACAGAAACCAAGTAGTTGAATGGAGCAAGTCAAAGACAAGCC
TTCCTCTTTCACCTTTGATGGCGTCACCAAGACACTTGTTGTGATGGGAAGCAGAAGAGAAGCAGCGGAGACTAGAAAGACAATTT
GCATGTAGTTTTCGACTCTGAGAGATGAACGGGCCATGAGACGAGCGGCAAGAGAGCTTCCCAACATGGAGGCCAACATGAAGGTC
GCAAATACGAAGCCATGTGGAATTTCTTCGTCGTTTGGGCTCAGAGCTGGTGTCCACAGGAAAACAAATGTGTACATCGAGGCTTC
AAAAAGAGATTGAATAGCCCCTAGCAATGCAATCTTCTCATCTGAAGCTATGGCTATGGCAGCAACTTTGAACTGAGTCAGCAGAT
CTTTACTGTCCGATGGATCTCCATAATTCTCCGACCATGTTGACAAAATGATGGCCATTCCAATCGCAAGAATGCATGCGGCGGCG
TCAAAGGGAGCTACAGGGCCAAATGAGAAAGTATCGACAAGAAGGTTTCCAAACAACCCGGAGAGAATAGCGACCAGACCATTTCC
AAGGAAAACCGCCTTAGAGAATGTCAGTGACAGCCACTGTTGGTCAAAGTTCCTCTTGTTGTGCTCAGCAATGAGCCAAGATTCAA
AGGCTGAAAACAAGAGAGAAGTAGCAATACCACCCAAGATACGACCAACCATCAAAACTCTGTACTGTGGAGAGTGCTTGGTGATG
CAGCTCAATATGTAAACTATGCAGTAAGTAACACATGCCCTCTTTCGACCCTGTTTGTCAGCGAGAGATCCAACAATGGTACCAAA
CAACATGGAGGAGCCAAAACCAGCGATGAAAAGTTGACCAATATCTCCTTTCCCGAAACCATAAGTGCTGTACAGGTAATACACAT
AAGGTCCCTGAAGCCAATCCCTAGCCATCATGATAGAGAAGACGACGAGGTAATTGTTCTTGAAGGAATTGAAGGAAGAAGAAGTG
TTGATCCGATCCTTGTTTGTTTTGCTCAGCTCCAACGCCGCCACTACGGCAGCCATCACTCCGAACACCAAGTAGTAGAATACCTC
CATTCTTGCTTTCGCTTCTCCTCTCACTCTCTGAGTTGGAGACAACTAGCTAGAAGAAGAAGAAGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877664 hypothetical protein ARALYDRAFT_906210 [Arabidopsis lyrata subsp. lyrata]22821e-254
NP_190500 major facilitator protein [Arabidopsis thaliana]22812e-254
BAF00743 hypothetical protein [Arabidopsis thaliana]22741e-253
XP_002274807 PREDICTED: hypothetical protein [Vitis vinifera]20518e-228
XP_002869545 hypothetical protein ARALYDRAFT_913755 [Arabidopsis lyrata subsp. lyrata]20501e-227

Swiss-Prot top hits (Blast detail)Scoree value
Q0VC03 Major facilitator superfamily domain-containing protein 56841e-070
Q921Y4 Major facilitator superfamily domain-containing protein 56831e-070
Q6N075 Major facilitator superfamily domain-containing protein 56777e-070
Q5R542 Major facilitator superfamily domain-containing protein 56742e-069
Q28E13 Major facilitator superfamily domain-containing protein 55253e-052

TrEMBL top hits (Blast detail)Scoree value
Q9CA11 At3g4931022811e-254
Q0WQ56 Putative uncharacterized protein At3g4931022747e-254
B9RPL3 Putative uncharacterized protein20499e-228
Q9C5R0 AT4g27720/T29A15_21020499e-228
A9PB29 Predicted protein20282e-225

Arabidopsis top hits (Blast detail)Scoree value
AT3G49310.1 LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 550 Blast hits to 545 proteins in 201 species: Archae - 5; Bacteria - 285; Metazoa - 85; Fungi - 33; Plants - 99; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).22825e-257
AT4G27720.1 LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64650.1); Has 496 Blast hits to 491 proteins in 183 species: Archae - 5; Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).20504e-230
AT1G64650.1 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 565 Blast hits to 562 proteins in 197 species: Archae - 7; Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).19788e-222
AT1G64650.2 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 548 Blast hits to 545 proteins in 182 species: Archae - 5; Bacteria - 298; Metazoa - 76; Fungi - 38; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).17735e-198
AT2G23093.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49310.1); Has 251 Blast hits to 248 proteins in 89 species: Archae - 0; Bacteria - 66; Metazoa - 68; Fungi - 18; Plants - 79; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).2474e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  22%
 
202  22%
 
102  22%
 
82  22%
 
211  11%

Unigene MembersMember information