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Information for unigene UN19342

FASTA Sequence
Unigene ID: UN19342Length: 1386 SSR 
AAAATCAATAAACCTCAGATAAATAGTTAACCGAATCGGTTTTACAAACATTTGTAAATTGGATGAACAAATATTTGTTGTTGGCA
TATGGGATCATAAGTTCACAGTCTCTCTCTCTCAAATGGCATTTAAACCAAATGTATAAATTTTTTTTTTCTGCAAGTATACCAAA
TTAGATGGCTTGTTCTTTCTTTCTCGAGAATTGGGGAACAGAATGACGGTTCTTTTTTTTTCCCGGTGGGGTGGTCAGCGAGTATC
AATGGATCCCAGAGTTCCAGGAAACGGGGCCTGAGGTTCCAGAAGCAATGCAAGAACTGGAGGAAGAATGAGCAGAAGAAGAGTGT
TGATGTGTAGAGGAAGGCGAAGAAACTCTATTCTGCTGCTGCAGCTTGTGTTCTTGCATCAGTTTCAATATGTAAGCATCGTCATG
GACCGAGAAAGGCGTGCTATTGAAGTCGAGGTGTACAAGTTGCATGTCTTCAGAAATCTCGATTTCGACTACTGCATGAGGATTTG
TCTCAAGTAGGATGAATGGTAAAGTAAATCCTTCTGCTGGTCCTTCGGTCTTCACAACCATCTCCTTGTTTCTCGACATAAGACTT
TCAAGACTTGATACCTTTTCTCTCAATTCTTTGAGGAAAGCAGCCTTCTTTTGCACACTATTCATAATCTTATTTCGATCCATCTT
AACTTCTTCCACATCTTTCTTGCAGGTAATGGGAAGGCCTTTCCAACGGATTTCCTTTTTATCCCTTGCGATGATATCCAGCGCCA
TGAAGACATTTAGTGCATCATACACTCTCCTCCTTATGTTCTTCTCGTTATACTCATTGTCATTCAAAGGCTTCTCTGCGTTCTGT
TTAATTGTTGCAAAATCAGAAATTATTTCATCTGCAACCTCCTTGTAAGTAGTTATCTTCTTAGCTTCCAACTTCTGACAAACCAT
AACGCTGAATTGGCGAAGACCGCCACCAGAAGTTCTTGATTGACATTTCTTCTCAGAGACAACCTCGGATTCGTCATCAACTATCA
ATCTCCTTCTCACAGGGGTCTTCCCCAAGCTCACTGAAGAAGGATGGTTCCTCTGCTTCTCTGGTGTCACAAACAAATCCGTCTCC
ATCCCTTCCTTCCTTCTCTCAGTGTGATCGCCTCCAATGGCGGAAACTGGAGACTTTCTAGGGTTTTGTTTTACAGAGAGAGAGAT
GGCAACAACAACAACAAACCGGAGAGGTTTCGGTTTCGGTTACGGTTAAATTAGCGTCTTCGCGCTTTAATAAAAACTGATCAAAT
AGTAAAAGGATGACAAAACGCAGAAAGCAACAGCGATGCTTCTCCCCCATAGCCCATCAAAGCCTCTAACACTCTCTCTGTGTTTT
TGGAACCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195867 Transcription factor DP [Arabidopsis thaliana]12962e-140
XP_002873053 hypothetical protein ARALYDRAFT_487025 [Arabidopsis lyrata subsp. lyrata]12953e-140
CAB85984 DP-2 transcription factor-like [Arabidopsis thaliana]12872e-139
XP_002270000 PREDICTED: hypothetical protein [Vitis vinifera]7173e-073
CBI30570 unnamed protein product [Vitis vinifera]6976e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q14188 Transcription factor Dp-23712e-034
Q14186 Transcription factor Dp-13513e-032
Q08639 Transcription factor Dp-13496e-032
Q17QZ4 Transcription factor Dp-13471e-031
Q22703 Transcription factor dpl-13291e-029

TrEMBL top hits (Blast detail)Scoree value
Q9FNY3 At5g0247012961e-140
Q9LZ55 DP-2 transcription factor-like12872e-139
B9IFR2 Transcription factor DP, E2 dimerization partner protein6042e-060
B9MTF4 Transcription factor DP, E2 dimerization partner protein6007e-060
Q7XZI4 DP15962e-059

Arabidopsis top hits (Blast detail)Scoree value
AT5G02470.1 DPA; transcription factor12968e-143
AT5G02470.2 DPA; transcription factor12968e-143
AT5G02470.3 DPA; transcription factor12968e-143
AT5G03415.1 DPB; protein binding / protein heterodimerization5673e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  67%
 
201  33%

Unigene MembersMember information