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Information for unigene UN19351
| FASTA Sequence |
| Unigene ID: UN19351 | Length: 1747 |
SSR | | AAGTAGTAAATGTTTGAAAATCCGATATACCTGAAAGCATTGATCTGTGTAAGAATACATAGAAATTTGTTACAAAATATAGAAAG
ACAATTAAAAGCGAAAGAGTTTTATGGTGTTGGAGCTTTCTGGATTGCATTAGAATCTCCTCTCTCTCTCTCTCTCTTCGTATTGG
TGTATCTATAATGCCAAAACTCTGTATGACAGAAGAAGCGATGCCTTGCGTTCTTGTTCTACCTGTCACGCCGGTCCTTGGGGAGT
TGATCGATCTTCCTTAATCTGAACCTGAACCTCAAGCCGGTGTTTCTAGAGAGGAACTTCAGAATCTCATCAATGATGATAACTGG
AAACGAAAGATACAGAACGGCGGTCCATTCGCCCAAGGACAATGGCGTGACAGAAAATAAGACTGCTAGTGGATGAACATATAATA
TTAGTATGTGCAGAACCATCGTCAGGATAATTGACCCAACGAGCCATAAATTACTCCTCGGGGTTATAACCAGAAGGGATTGATTT
TCGCTGAGGTTATTTAGAGCATTAAACATCTCCACTACAACAAGTACTGTCATAGCCACGGTTGATGGATGTCGATCCTCAAATAT
GCTGCATGGATAACTTGTCTCTCTAAGTGCGCACGTTTCAAAATTCATCAGTTCACTGTAAGTAAGTTTAGGACCACCATCAGAGT
AAATAAACCACCATATAAAGCCAGCAACAGTTGCCAGGCCAACATAAACTCCGATAACCAAATAGCGGAAGAATAACCACCCAGTG
ACCACTGCTTCACCAACCTTTCGGGGTTTTGCCTTCATAACATCGGAATCTTGTTTGTTAAAGCCAATGGCAGTGGCAGGCAATCC
ATCCGTTACCAAATTGACCCACAAAAGTTGAACAGGTGCAAGGGTATCAGGAATTCCCAGTACAGCTGCTACAAATATACAAACAA
CTTCCCCGATATTTGAAGAGATCATGTATCTAATGAATTGCTTAGTGTTATTATATATAGCCCTTCCTTCCGCAACAGCCGCAACT
ATTGAAGCAAAATTATCATCAGCCAAAACCATATCTGAAGCGCTCTTAGCTACAGCTGTTCCAGAACCCATGGCAATCCCAATGTC
AGCTTTCTTCAATGCAGGGGCATCATTTACGCCGTCACCAGTCATTGCCACCACTTCATTTTGGTTCTGTAGGGCTTCAACAAGCA
TCCTTTTGTGAGAAGGTTCAACCCTGGAAAAAAGTGTCATCCGTTGCAATGCTGTAGTTTGTTGCAACGCTGGAAGCCGTTCAAAT
TCAGAAGCCGTATAAGACAGACCAGAAAAGTCGACCAGATTGTCGAATGCCCCTATTTTTCTACATATTGACTCTGCTGTGGACTT
GTTATCCCCAGTTACGACTATAACACGAATACCAGCAGTCATACAGGCAAGCATAGCATCTCTAACTTCTTTTCTTGGTGGATCAA
GCATTCCCACCAACCCAATAAACGTCAGGTCGTTCTCATTATCATAAGAAATAGTTTGCTGACCATGGTGCACGGTTTTGAAGGCT
AGTGCTAAGCATCTCAATGTTTCATCTCCAAAACTGGCGAACCTAGACTCAAGTTCTGCACGGGAAGCAGCAGTGAGAGGAACAAC
AGAACCATCACTGTTGCAGAGAAGTTTAGTACATCTAGCAATTATACTTTCTGGAGCACCCTTTGAAAACATTACATCCATTTGCT
TATGGCTACATAGGACGCTCATCATTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889791 Ca2+-ATPase [Arabidopsis lyrata subsp. lyrata] | 2465 | 8e-276 |
| NP_563860 Ca2+-transporting ATPase [Arabidopsis thaliana] | 2460 | 3e-275 |
| CAA10660 Ca2+-ATPase [Arabidopsis thaliana] | 2455 | 1e-274 |
| AAD29961 putative endoplasmic reticulum-type calcium-transporting ATPase 3 [Arabidopsis thaliana] | 2446 | 1e-273 |
| AAT68271 ECA3 [Arabidopsis thaliana] | 2444 | 2e-273 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SY55 Calcium-transporting ATPase 3, endoplasmic reticulum-type | 2460 | 1e-276 |
| Q64518 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 | 1388 | 3e-152 |
| P22700 Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type | 1383 | 1e-151 |
| P18596 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 | 1378 | 4e-151 |
| Q9YGL9 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 | 1373 | 1e-150 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGX9 AT1G10130 protein (Fragment) | 2260 | 3e-252 |
| B9R6Y5 Cation-transporting atpase, putative | 2130 | 4e-237 |
| Q94IM8 P-type ATPase (Fragment) | 2017 | 5e-224 |
| Q10DF1 Calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed | 1996 | 1e-221 |
| B9GNN5 Endoplasmic reticulum [ER]-type calcium ATPase | 1844 | 5e-204 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G10130.1 ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3); calcium-transporting ATPase/ calmodulin binding / manganese-transporting ATPase/ peroxidase | 2461 | 8e-278 |
| AT1G07810.1 ECA1 (ER-TYPE CA2+-ATPASE 1); calcium-transporting ATPase | 872 | 1e-093 |
| AT1G07670.1 calcium-transporting ATPase | 869 | 3e-093 |
| AT4G00900.1 ECA2 (ER-TYPE CA2+-ATPASE 2); calcium-transporting ATPase | 839 | 1e-089 |
| AT3G63380.1 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) | 516 | 3e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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