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Information for unigene UN19352

FASTA Sequence
Unigene ID: UN19352Length: 779  SNP
GGAAAGTATTGTTTCTTCATCGCTTCAGATCATCCTCCAATGGCTGTCAACGCTCCCATATCGTCTCCGGCAGCTCACCCGCGAAC
ACAGTTTCTTTCCAACCCCGTTCTCCCTCGCTTCCAACGGTCATACTCCGCCGTAAAAGCACCAGCAGCAGCCTTCTCCGTCGTCT
CAATGGCTCCTCAGAAGAAGGTGAACAAATATGATGCCAAGTGGAAGAAACAATGGTACGGGGCGGGACTATTCTTCGAAGGAAGC
GAAGAAGTAAACGTCGACGTTTTCAAGAAGCTTGAGAAGCGAAAAGTGCTGAGCAACGTTGAGAAATCTGGTCTTCTCTCGAAAGC
AGAGGACTTGGGAGTCACATTGTCATCTCTTGAGAAGCTTGGTGTTTTCTCCAAAGCAGAGGAGCTCGGTCTTCTCAGTCTCCTTG
AAACTCTAGCCGGTACATCCCCTGCGGTCTTGGCCTCGGCTGCACTCCCGGCTCTGACGGCTGCTATTCTAGCTCTGGTGCTGATT
CCTGATGACTCTACTACTCTGGTGGTTGCTCAATCGGTTTTGGCTGGTGCTCTTGCGCTTGGAGCTGTTGTTTTGTTGGTTGGTTC
TGTTGTTTTGGATGGACTTCAAGAAGCTGACTGATTCTTTGCTATGTAAAAGTTGTAAACCAAACTTAAATAAACCTTTTGTTCAA
TTGATTTATGTTAGTTTGCTGATATCATTAATTTAAGGTTGTGATTCGGTATATCATAGTATAAATGTTTGAAAACTAGATTTGGA
TATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AEI52297 hypothetical protein [Brassica napus]9114e-096
AEI52298 hypothetical protein [Brassica napus]9096e-096
AEI52299 hypothetical protein [Brassica napus]8854e-093
AEI52296 hypothetical protein [Brassica napus]8845e-093
XP_002887556 hypothetical protein ARALYDRAFT_476610 [Arabidopsis lyrata subsp. lyrata]8291e-086

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94F10 Putative uncharacterized protein8225e-086
Q9SSF7 F25A4.30 protein8225e-086
A9PJV1 Putative uncharacterized protein6139e-062
B9I306 Predicted protein6112e-061
B9R945 Putative uncharacterized protein6012e-060

Arabidopsis top hits (Blast detail)Scoree value
AT1G74730.1 unknown protein8232e-088
AT5G08050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500), Uncharacterised conserved protein UCP022207 (InterPro:IPR016801); Has 41 Blast hits to 41 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1646e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  23%
 
117  54%
 
92  15%
 
71  8%

Unigene MembersMember information