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Information for unigene UN19362

FASTA Sequence
Unigene ID: UN19362Length: 1308 SSRSNP
GGGTTTTCCACTTAGCGTTTCCATGGCGGCGGTTATCGGAAACGTGGCGCTGTTACTCGACGTCAACTCTCACCGTACGGTGGTCA
CTGATCGGAGAATTCGCTTGGCGGTTGTCGACGTCGTCCTGAATCTACCGAAGAGAGACTCATCGCACGGTTACGTTTCTTCTCAC
TACGCGTCTCTCTCATCAAACAAGCCTCTTGAATCTGACGGAGAGGCTCGGAGTCGCCGGTTTCTGACTCGCGGAAAGGCGAAATC
AAGGGCTAACGTCGTGGATTACGACGAGGCCGGATCCAGCGACGAGGGTGAGGGGAAGGAGAGTGATGACGAAGAAGATGAAGAAG
CGTACGATGTTGAGAAGGAGATGAAGAGGAGAGCTAAGGAGCTGCAGGATATGAAGGAGCTTGAGAGGAAAGCAGAGGAGTTGCAG
TATAAGATTGATGAAGAAGGTGGTGATGATGATTCAGAGGAGAAGAAGAGGATGAGGGTGAAACGAGAGCTCGAAAAGGTAGCTCA
GGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTGATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGCGA
TTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCTTTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATAT
GAGGCCAATAATCGCCACGCTGATTGCATTGATCTTTATCAGCAACTAGAGAAGAGACACCCGAGTCCTGGTATCCGTCGTCAAGC
TTCTGAGCTTAGGTATATCTTGCAAGCTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATCGGTTCAAGCT
ACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGACAAGGACAGGAGGATGAATGAATCGACTACGAATCAGCTCAACTCG
AGTGAAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAGAAGAACAAAGTCTTTTGGCTTTCTTTGACGCT
GTGGTTTGGTTTAGTTGGAGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGAGGAAAAGACTCTTTCGTCCCAGGTGTGGTACT
GTTTCATCTCTCTCTCTCTCACTGTCTTGTAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATATCTCATT
GTAGATAAAAAAAGTGTTGGATGTCTGGAACTATATCACTTTGTTCTGTATTAGTATTGTACTGTAATTGTTTATTCAGAAAAAAA
ATTGTTTATTCAGTGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875323 binding protein [Arabidopsis lyrata subsp. lyrata]15767e-173
NP_189290 uncharacterized protein [Arabidopsis thaliana]15588e-171
BAJ33631 unnamed protein product [Thellungiella halophila]15202e-166
XP_002272662 PREDICTED: hypothetical protein [Vitis vinifera]11789e-127
XP_002527926 conserved hypothetical protein [Ricinus communis]11286e-121

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q38955 Emb|CAA66827.115585e-171
B9SPK7 Putative uncharacterized protein11284e-121
B9SPJ8 Putative uncharacterized protein9716e-103
O24366 Putative uncharacterized protein sam2B9601e-101
B9I8F3 Predicted protein7583e-078

Arabidopsis top hits (Blast detail)Scoree value
AT3G26580.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide region (InterPro:IPR013026); Has 2147 Blast hits to 1154 proteins in 168 species: Archae - 2; Bacteria - 99; Metazoa - 1301; Fungi - 180; Plants - 105; Viruses - 57; Other Eukaryotes - 403 (source: NCBI BLink).15592e-173

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  25%
 
62  25%
 
113  38%
 
71  13%

Unigene MembersMember information