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Information for unigene UN19363

FASTA Sequence
Unigene ID: UN19363Length: 1121  SNP
GGGAAGCAAAAGAAAAGTTCCCGAGCTGCTCTATAAACCTTTCTCCAACAACGCAACAAGAGCAGCAGCAAAGCAAGCAAGAAGAA
GAAAAATGTTCAGGAATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTTCCAAGTGGAATACGCCATGGAA
GCAGTGAAGCAAGGCTCCGCCGCGATCGGACTCAGATCTCGCTCCCACGTCGTCCTCGCCTGCGTCAACAAGGCCCAATCCGAGCT
CTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCATATTGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCT
CTCGTTACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTCCCCGTCGGACGTCTCGTCGTTCATCTCGCT
GATAAGGCCCAGGTCTGTACCCAGCGATCATGGAAACGTCCATATGGCGTGGGTTTGTTGGTAGGTGGATTGGATGAGTCCGGAGC
CCATCTTTACTACAACTGCCCAAGCGGAAACTACTTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGACTT
ATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATCTGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTG
CAAGGAGAAACACTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTCGGTGAGCCGTTCCACTTCTTGGACCAGGAAACTAT
CCAGAAAGTGATTGACACATTTGAGAAAGTACCTGAAGAAGAGGAAGGTGAGGCTGGTGAGGGTGAGGCTGAAGCTGCACCAGCGG
AGCAGGGTGGTGATGGTGGTGGTGCAGGTGACCAAGACGTGGCTCCAATGGAAATGTAGGCCTTTGTGTGGAACGCTGTGAACTGT
TTTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCGCAGCGGTTTTAGATTATATGCTCGAAAACCTCGTG
GGGTTGAAATCATTTGGTCATTTTAATTTCATAGCTATCGTTAAGACTGTTGTTCCATCTTTTCATTTAAATATGTTCACAACTCC
ATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC32062 20S proteasome subunit PAF1 [Arabidopsis thaliana]13427e-146
AAM61575 20S proteasome subunit PAF1 [Arabidopsis thaliana]13427e-146
NP_199093 proteasome subunit alpha type-1-A [Arabidopsis thaliana]13292e-144
XP_002863736 20S proteasome subunit PAF1 [Arabidopsis lyrata subsp. lyrata]13122e-142
NP_175158 proteasome subunit alpha type-1-B [Arabidopsis thaliana]13032e-141

Swiss-Prot top hits (Blast detail)Scoree value
P34066 Proteasome subunit alpha type-1-A13291e-145
O23712 Proteasome subunit alpha type-1-B13031e-142
P52428 Proteasome subunit alpha type-19695e-104
Q27562 Proteasome subunit alpha type-16783e-070
Q9R1P4 Proteasome subunit alpha type-16604e-068

TrEMBL top hits (Blast detail)Scoree value
B9R7X1 Proteasome subunit alpha type11687e-126
A9P9K9 Proteasome subunit alpha type11571e-124
A9P9A3 Proteasome subunit alpha type11517e-124
A5C3G9 Proteasome subunit alpha type11283e-121
B9H4D2 Proteasome subunit alpha type11185e-120

Arabidopsis top hits (Blast detail)Scoree value
AT5G42790.1 PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase13307e-147
AT1G47250.1 PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase13047e-144
AT1G53850.1 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase3834e-037
AT1G53850.2 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase3834e-037
AT3G14290.1 PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase3801e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
97  54%
 
211  8%
 
182  15%
 
112  15%
 
71  8%

Unigene MembersMember information