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Information for unigene UN19378

FASTA Sequence
Unigene ID: UN19378Length: 910 SSR 
ACGAAAAAACTTACTAAATATTATTCGATCGAGAATGATGGGAGAATATTTGATAATGGAATTTTCATAAGATCATTGATACAGAC
AAAGAAACGAACCAGCAAAGGAGTAGAAGCCTAAACCTACTTAGATTTCTTGACAGCAAGACTTAATATCAGTAGCAACTAGCAAC
AGGACCAAACCGAAAAGAAAATAATATTAAACAGGTTTTAACCACCGAACCCATAGAGAGTTCGTCCTTGCCTCTTCAAAGCGTAA
ACAACATCCATCGCCGTCACCGTCTTCCTCCTCGCGTGCTCCGTGTAAGTCACGGCGTCTCTAATCACGTTCTCGAGAAAGATCTT
CAGAACCCCTCTCGTCTCTTCGTAGATCAACCCGCTGATCCTCTTCACTCCTCCTCTGCGAGCGAGACGCCTGATCGCAGGCTTTG
TGATTCCTTGGATGTTGTCTCTCAGAACCTTCCTGTGCCTCTTCGCTCCTCCTTTGCCCAGTCCCTTTCCTCCTTTCCCTCTTCCT
GACATTTGGAACTTCTTTCTCGATTGGAGTTTAGATTGATATGATGATTTTGACTGTGACGATGGAGATTGAGATTTGTGTTTATA
AAGGAAGACGAAGTGAACCGCAGCCGTTGGATTAGTGTTTTTATTGTACGGATATGGATGACGATCCGAGAGAATGTTTAAGCGTC
ACAAGAGACCAACGTCATCATTCGTATGTGGCTAGTAATGGGCCTATATGGATACTCCCTCTTTTATCAGCAGAGGCAGCTTCACG
TTAAAGGTTTCCTGGTGGAACTTGGTCTTCAGAGCTCTCTCTCTCTTCTTTGCCGCAGCTCGAGCTCTCCCTCTCTCTCTTCTGTG
TTTTGGCTCTCTTGTCTCAAGCTCACACATGCTTAGCTCACTCTCTCGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002746145 PREDICTED: hypothetical protein LOC100405337 [Callithrix jacchus]5414e-053
XP_543797 PREDICTED: similar to germinal histone H4 gene [Canis familiaris]5361e-052
XP_002170019 PREDICTED: similar to Histone H4 replacement CG3379-PC, partial [Hydra magnipapillata]5361e-052
XP_002721657 PREDICTED: histone cluster 1, H2ag-like [Oryctolagus cuniculus]5333e-052
CAF98839 unnamed protein product [Tetraodon nigroviridis]5299e-052

Swiss-Prot top hits (Blast detail)Scoree value
P62785 Histone H4 variant TH0115232e-052
P59259 Histone H45232e-052
Q6PMI5 Histone H45232e-052
Q6WZ83 Histone H45232e-052
Q6LAF3 Histone H45232e-052

TrEMBL top hits (Blast detail)Scoree value
Q4SKJ3 Chromosome undetermined SCAF14565, whole genome shotgun sequence5297e-052
A7TCZ1 Predicted protein5252e-051
D2I091 Histone H4 (Fragment)5252e-051
B0X696 Histone H45242e-051
A2WWR4 Histone H45233e-051

Arabidopsis top hits (Blast detail)Scoree value
AT1G07660.1 histone H45241e-053
AT1G07820.1 histone H45241e-053
AT1G07820.2 histone H45241e-053
AT2G28740.1 HIS4; DNA binding5241e-053
AT3G45930.1 histone H45241e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  40%
 
92  40%
 
81  20%

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