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Information for unigene UN19381

FASTA Sequence
Unigene ID: UN19381Length: 987 SSR 
GGACCTCTGAGACCAAGTAGAGATGAAAGCAATGAGTCTGATTACGAATAAGGTTGAGAGAGCCGAGCTTAAACCTGGTGATCACA
TCTACACTTACCGAGCCGTCTTCGCCTATTCTCACCACGGTGTGTTTGTTGGTGGTTGTAAGGTGGTTCATTTCAAACCTGAGCAA
ACCTTGAAAGCAGCTCCCACACTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTTCAGAGGTTAATGATTCTTC
AGAAGCTCCTTGCCCTACCTACCCTGACTGTGGATTCAAACAACCAAACAGTGGAGTACTACTCTCTTGCCTTGACTGTTTCCTCA
AGAACGGTTCTCTCTACCGCTTCGAATATGGAGTCAGCTCATCCATTTTCTTAACCAGAGTCCGAGGTGGTACCTGCACAACCGCT
CCATCTGACCCCTTTCAGACAGTTGTCCACAGAGCAATGCACCTTCTCCAGAACGGGTTTGGTAACTACGACATCTTCCAGAACAA
CTGCGAAGATTTTGCTCTCTACTGCAAGACGGGACTGCTCATTCTGGATAAGAACGGTGTTGGGAGAAGCGGTCAAGCCAGCTCCA
TTCTCGGCGCTCCTTTAGCTGCACTCCTCTCTTCACCTCTCACGCTGTTGATTCCAAATCCTGTTGGTGTAGCGACAGTCACTGCT
GGGATGTATTGTATGAGCAGGTATGCTACTGATATAGGTGTTAGAACCGATGTGATCAAGGTTCCCGTTGAGGATTTGGCTCTGAA
CCTTGGTATTAAAACCCTCAAGAAAAGGTGAAAAAGCTTATGGCTCTTGCATTTGCAAGTGAACATAGATTCTATCATGTACATAA
GACTGGCCAGTTTTTTTAGCTATGATCTTGATTTGTCCTTGATCTCATCTCTTGTTTTCTATTGAGAAACTGTAAAGATTCTCTAG
GTTTTATTGTGGTTTCCAACATTATCAAGATTTAGTTCTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875007 hypothetical protein ARALYDRAFT_490474 [Arabidopsis lyrata subsp. lyrata]11921e-128
NP_680550 NC domain-containing protein-like protein [Arabidopsis thaliana]11875e-128
NP_563621 NC domain-containing protein-like protein [Arabidopsis thaliana]9563e-101
AAM64633 unknown [Arabidopsis thaliana]9546e-101
ACU19633 unknown [Glycine max]8032e-083

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EAE0 Uncharacterized protein At4g00905.111874e-128
Q29PY0 At1g012259562e-101
Q8LBP8 Putative uncharacterized protein9544e-101
C6TCT1 Putative uncharacterized protein8031e-083
B9SBD5 Putative uncharacterized protein8003e-083

Arabidopsis top hits (Blast detail)Scoree value
AT4G00905.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 84 Blast hits to 83 proteins in 19 species: Archae - 0; Bacteria - 10; Metazoa - 6; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).11953e-131
AT1G01225.1 NC domain-containing protein-related10099e-110
AT3G02700.1 NC domain-containing protein5743e-059
AT5G06370.1 NC domain-containing protein5251e-053
AT5G16330.1 NC domain-containing protein3162e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
92  40%
 
181  20%

Unigene MembersMember information