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Information for unigene UN19382

FASTA Sequence
Unigene ID: UN19382Length: 881 SSRSNP
GGATTTTCACTTCTCTTATCATTCTGTCCGCATAGATTGATGTCCATGGAAGAGCTAAAACCTTCGAACAATAAGATTCTTGAGCA
GCTGAGACATGGGCTCGCTCGGTTCGAGCTTGTGTCCTCCCCTACTCTTTCAGTCTCCTCTGCTTCCTTCTTGGGCGCCACGCAGA
GCAATAGCTATGCCTTCTTCGCCAGAATCGGTTCCTCCTTAAATGGGTCTCCAGCAGCGAAGAAGGTTGAGCAGTACGCTGTGGAT
AGAGTTACTGGGGATGGTCGCTGTCTCTTTAGAGCTTTGGTGAAAGGAATGGCCTTTAACAAGGGTCTTACTATCAATCCCCGGAG
AGAGAGAGATGATGCAGATGAACTACGAATGGCTGTGAAAGAGGTTATATGCAATGACCCTAAGGAAAGAGACAAGTACAAAGAAG
CTTTAGTAGCTATCACTGTGGAAGAGTCTCTGAAACGGTACTGCCAGAGGATTGGAAGACACGATTTCTGGGGAGGGGAATCTGAG
CTGCTTGTTCTTTCCAAGCTATGTAAACAGCCAATCATCGTCTACATACCAGAGCATGAGCATAGGAGAGGAGGAGGGTATGGGTC
GGGTTTTATACCGATTGCAGAGTATGGAGCTGAGTTTAGAGGAGGCTGGGGAAAAGGGAACAAGACCAAGAATGTTGTTAGGCTTC
TTTACAGTGGTAGAAACCATTATGATCTGCTTCGCTAGACCTGAGATGATTGAAGTTTTCTACTTCCTGTTGGAATCCATGATTCC
AAATTTGTTTAAAAACTTTCAATGCAAAAAACATGAACATGTACCAGTTCTCCCTTCTCTGCTATAGGTGGATATTTCAATTGAAT
TTGGATTCGGTTCAGTTCGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850290 cysteine proteinase-like protein [Arabidopsis thaliana]9062e-095
XP_002881560 hypothetical protein ARALYDRAFT_482809 [Arabidopsis lyrata subsp. lyrata]8991e-094
XP_002277660 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]7807e-081
XP_002277681 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]6382e-064
NP_001049654 Os03g0266000 [Oryza sativa Japonica Group]6212e-062

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GYW0 At2g380259061e-095
B8AKN1 Putative uncharacterized protein6211e-062
Q10NL4 OTU-like cysteine protease family protein, expressed6211e-062
C5WQ46 Putative uncharacterized protein Sb01g0400606149e-062
B4FU62 Putative uncharacterized protein6041e-060

Arabidopsis top hits (Blast detail)Scoree value
AT2G38025.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: OTU-like cysteine protease family protein (TAIR:AT3G57810.3); Has 100 Blast hits to 100 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).9075e-098
AT3G57810.1 OTU-like cysteine protease family protein1711e-012
AT3G57810.2 OTU-like cysteine protease family protein1711e-012
AT3G57810.3 OTU-like cysteine protease family protein1711e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  23%
 
116  46%
 
122  15%
 
102  15%

Unigene MembersMember information