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Information for unigene UN19386

FASTA Sequence
Unigene ID: UN19386Length: 580  SNP
GGAATCATCACAATCTCAAACCTAAAATAAATTAAAAGGAATCTACGTTGAAGGAGAGAATAGAGAGAATGGGTCGCCAAAACGTT
TTCGTAGTTTTTGGCCTTGTGTTCTTGGCCGTCCTTGGCCTCGCAGCAGCTGCATCTTCTCCATCTCCTTCATCGTCACCCTCCAA
AGCTCCGTCTACTCCCACAACTGATGTCGAAGCTCCAGTGTCCGAGGATACTATTGGAACCACCGACGACGATGCAGCTGCTTCTC
CTGGTGACGGTGACGTGGCTGTCGCTGGTCCTCTAGGAAGTGACTCCTCATATGGTAGCATTGCACCTTCAGGCCCTGCTGCTGAC
AGTGGCGCGGCGGCTCTTGGTGTCTCTGCGGTCGTTGTTGGTGTTACATCCATCGCTGGATCTTTCTTGTTTCTCTGAGGTGTGTT
ATTATCGTGAGAAGATCTTTATCTTTAATGGAGACTATTTATATGTATGGATGATTGTGATGATTATGTTGTAATTTGTTTCCTCT
TTATTACGAGAAACGATTGTCTTTGTAATAAAAATGAAAATGACGAAACTTCCCATTAGCAGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P41507 RecName: Full=Anther-specific protein BCP14972e-048
CAA48292 bgp1 [Brassica rapa]4821e-046
XP_002893445 hypothetical protein ARALYDRAFT_890221 [Arabidopsis lyrata subsp. lyrata]4362e-041
AAM64679 putative agp1 [Arabidopsis thaliana]4282e-040
NP_173860 homolog of Brassica campestris pollen protein 1 [Arabidopsis thaliana]4263e-040

Swiss-Prot top hits (Blast detail)Scoree value
P41507 Anther-specific protein BCP14971e-049

TrEMBL top hits (Blast detail)Scoree value
Q07634 Bgp1 protein4827e-047
Q8LBM3 Putative agp14281e-040
Q9FYL2 F21J9.184262e-040
Q38973 Agp1 protein3894e-036
Q0IGN3 At1g245203851e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G24520.1 BCP14271e-042
AT3G26110.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: BCP1 (TAIR:AT1G24520.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1691e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  38%
 
64  50%
 
81  13%

Unigene MembersMember information