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Information for unigene UN19392

FASTA Sequence
Unigene ID: UN19392Length: 904  SNP
GGGTTTTCAGCTCTTTTCACTAACTCTCAAGGAAGAGAAAGATCTGAAGGTCGAATGGTCGAGGAGAAGAATCTCTCTTAGATCGT
TTGATCTGATCCGAAGAAGAAGATGGGAATCCTGTTCACGCGGATGTTCTCTTCAGTGTTCGGCAACAAAGAAGCTCGTATCCTCG
TCCTCGGTCTCGACAATGCTGGCAAAACTACTATCCTCTATCGGCTTCAGATGGGGGAAGTTGTCTCCACGATTCCGACTATTGGG
TTTAACGTGGAGACTGTGCAGTACAACAATATCAAGTTTCAGGTCTGGGATTTAGGTGGACAAACGAGCATCAGGCCATACTGGCG
ATGCTATTTTCCGAATACACAAGCAGTGATCTATGTTGTTGACTCGAGCGATACAGATCGAATCGGTGTGGCAAAAGAGGAGTTTC
ATGCTATTTTGGAGGAAGAGGAGCTGAAAGGGGCGGTTGTTCTCATATTTGCAAACAAGCAGGATCTTCCTGGTGCACTCGATGAT
GCCGCTGTGACAGAAGCCTTGGAGTTGCATAAGATAAAGAGTCGCCAGTGGGCAATCTTCAAGACTTGTGCTGTTAAAGGCGAGGG
GCTTTTTGAGGGTTTGGACTGGTTGAGTAATACATTGAAGTCAGGAAGTGGGTAGAAAACTTTCTCGTCATCCGCTCAACATTGTA
TCTTATCTTCTTTACGTATGTTTAGTGATTTGCTTAGTTCTTCATTTTAAAGAGTTAATATCAATGACATGTTCACTTATTACTCT
TTTTTGTTTCCTTTTGAGAGAGAAAAAAATCTCTTCACGGATCTGTGATTGGAACCCATAAGAGATATATCATGTTTTTCTTTATT
AATATGTTTTCTTGTAGGATATATCCAAGAACATTTTTTGGAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q96361 RecName: Full=ADP-ribosylation factor 19402e-099
NP_850057 ADP-ribosylation factor 3 [Arabidopsis thaliana]9375e-099
XP_002869315 ADP-ribosylation factor 3 [Arabidopsis lyrata subsp. lyrata]9285e-098
XP_002324937 predicted protein [Populus trichocarpa]9062e-095
XP_002309696 predicted protein [Populus trichocarpa]8991e-094

Swiss-Prot top hits (Blast detail)Scoree value
Q96361 ADP-ribosylation factor 19409e-101
P40940 ADP-ribosylation factor 39372e-100
P61211 ADP-ribosylation factor-like protein 16325e-065
P61212 ADP-ribosylation factor-like protein 16325e-065
P40616 ADP-ribosylation factor-like protein 16308e-065

TrEMBL top hits (Blast detail)Scoree value
A9PIU5 Putative uncharacterized protein9061e-095
B9ILB1 Predicted protein9061e-095
A9P9J4 Predicted protein8998e-095
B9IM33 Predicted protein8909e-094
C6TIQ6 Putative uncharacterized protein8909e-094

Arabidopsis top hits (Blast detail)Scoree value
AT2G24765.1 ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding9381e-101
AT2G24765.2 ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding6559e-069
AT5G14670.1 ATARFA1B (ADP-ribosylation factor A1B); GTP binding / phospholipase activator/ protein binding6083e-063
AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding6073e-063
AT2G47170.1 ARF1A1C; GTP binding / phospholipase activator/ protein binding6056e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  17%
 
73  25%
 
104  33%
 
123  25%

Unigene MembersMember information