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Information for unigene UN19397

FASTA Sequence
Unigene ID: UN19397Length: 859  SNP
GGAAATTGAAACATTTCATTGCAGTGGTCCCTTACACATCCTCACAACATCAACCAATATTATTATTGTTTTGCTCATCACACAAC
ACAAAAGAAAAAAAAAACAAAGAGAAAGAAAGCGATTAGTAGTACTAGTACCATATAAGCCTTAAAGACGAACCTCTTAGAACTTT
TACCATCCGAAGCAAAACACTAATATTACAGCATAGACACTACTAGTCTCCCACCTGGACCTCCATGTACTTTCCAGAAAACCTTC
ATAGCCTCATCAACCAATCCAGAATCAACAGCAACAGCTCCAAAGATGGCTCTGAACCCACCGCAAACAATCGCCGAGTTCGAGGC
ATCAGTCTTGGGAGAAACCCTGATAACCCTCTCCAAACCCAACCGGTTCCCATCAAGAGCACACGAGGACTCCACACTCGAAACCT
CCGCTATCAAACGGGTCAGAGCCTTGGAGGAGGTGTCGATGTCTTTGGAGAGAAGGTGAAGAGAGACAGCGGTTTCGATGAGATGG
GATCCGAAGATACTGAGGGCCTTGTTGTTCTCTTGAGAGAAGGAAGCGTGAGTCATTGCACGGCGAAGGAGGTTGATGTTTGTGAA
GTTGTAGCCGATTTGAGATTGCAGGGTTGCGAGATCGGTAGAGAAAGGCGAGGAGAATTGATTCGATTCTGACATTGGTTGCGCTA
ACCTGAGAAGAGGAGGAGAAGATCCCGATGACAGCTAGCGGAAGAATAAGGAGAAGCAGAGTGAAAGGATGTTGAGTCGTCACCAT
TGTTGAACCTCTCTTGTTTTCTCTTTCACTTTCGATTTCACCACTCACTCTCTGACTGTTGATAGACCGATCTTTGCTTCTGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173854 nuclear fusion defective 2 protein /ribonuclease III [Arabidopsis thaliana]6103e-061
XP_002893449 hypothetical protein ARALYDRAFT_472903 [Arabidopsis lyrata subsp. lyrata]6078e-061
ACU16904 unknown [Glycine max]4912e-047
XP_002280078 PREDICTED: similar to NFD2 (NUCLEAR FUSION DEFECTIVE 2); RNA binding / ribonuclease III [Vitis vinifera]4876e-047
XP_002318642 predicted protein [Populus trichocarpa]4553e-043

Swiss-Prot top hits (Blast detail)Scoree value
A9IIJ2 Ribonuclease 31315e-007
Q2KWY0 Ribonuclease 31226e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FYL8 At1g24450/F21J9_2106102e-061
C6T5A2 Putative uncharacterized protein4912e-047
B9I380 Predicted protein4552e-043
B9IEP6 Predicted protein4463e-042
B9RB54 Putative uncharacterized protein4212e-039

Arabidopsis top hits (Blast detail)Scoree value
AT1G24450.1 NFD2 (NUCLEAR FUSION DEFECTIVE 2); RNA binding / ribonuclease III6111e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  55%
 
95  45%

Unigene MembersMember information