Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19415

FASTA Sequence
Unigene ID: UN19415Length: 1566  SNP
GGAGACGATTTGTTTGGAGAGAAAAAAAAAGTGAAAGAAAGAGAGAAGCGGAAGAAACAATGTACAAGAGATCACCACTAACGTTG
CTCACCCTCCTGTCTCTGTTATTGGGATTCCTCAATCTCACCAACGCTCTTTACGGATCCTCGTCACCTGTGGTTCAGCTCACTGC
TTCTAACTTCAAATCCAAGGTACTTAATTCAAATGGAGTAGTGTTGGTAGAGTTCTTTGCACCATGGTGTGGTCATTGCAAAGCTC
TCACACCAACATGGGAGAAAGTGGCTACTGTTCTGAAAGGTGTTGCTACTGTGGCAGCTCTTGATGCAGACGCTCACCAGTCTGCT
GCTCAGGATTATGGTATTCAAGGCTTCCCAACGATCAAGGTCTTTGTTCCTGGAAAGCCTCCTGTTGATTACCAAGGAGCTAGAGA
TGCTAAATCCATTGCTAATTTTGCTTACAAGCAGATCAAAGCTCTTCTGAGTGACCGTTTGGAAGGAAAAAGCAAGCCAACTGGAG
GATCTAATGAAAAGAAATCTGAGCCTAGTGCATCTGTGGAACTAAACTCTGCCAATTTTGATGAGTTGGTCATCAAAAGCAATGAC
CTCTGGATCGTTGAGTTCTTCGCACCTTGGTGTGGACACTGCAAAAAGCTTGCCCCAGAGTGGAAAAGGGCTGCAAAGAACTTGAA
GGGGAAGGTGAAATTAGGTCATGTCAATTGCGATGTTGAGCAGTCGATTATGAGCAGATTCAAGGTGCAAGGATTCCCTACCATTA
TGGTATTTGGTGTAGACAAAAGCAGCCCATATGCTTATGATGGTGCTAGATCTGCGTCAGCTATAGAATCTTTTGCTACTGAACTT
GTGGAGTCTAGTGCTGGGCCTGTTGAAGTAACTGAACTTACCGGACCGGATGTCATGGAAAAGAAGTGTGGTTCTGCTGCTATTTG
CTTTGTCTCTTTCCTACCTGACATTCTCGACTCCAAAGCTGAAGGAAGGAACAAGTATCTAGACATGTTGTTATCCGTTGCAGAGA
AGTTTAAGAGACATCCTTACAGCTTTGTGTGGGTGGCGGCTGTTACGCAACCGGATTTGGAGAAGAAAGTCAACGTGGGAGGATAC
GGTTATCCAGCAATGGTAGCCATGAACGTGAAGAAAGCAGTGTATGCTCCTCTTAAAAGCGCATTTGAGCTTCAACACCTCTTAGA
ATTTGTGAAGGATGCTGGGGCAGGTGGAAAAGGAAACGTGCCTATGAATGGAACACCGGAGATCGTTGAGACAAAAGCGTGGGACG
GTAAAGACGGGGAAGTGATCGAGGAAGATGAATTCTCACTCGAAGAACTCATGGGAGGTGATGATAATGTAGGTACCAAGGATGAG
TTGTGAAGAATCCAGGGTTTGACCTGATTTCTCTACTTTTGGATTTCGAACCGTTGAATGTTTCTCACTCTTTTATATTTTGCCAA
AAAGAAAGTAAGATAAGAGACAGGAACTATCCATATGTAGAACTTCCCAAACATATTATCAGAGAATCTTTGGTGGAAGTGACATT
AGAGTACATCGCCCCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881252 hypothetical protein ARALYDRAFT_482234 [Arabidopsis lyrata subsp. lyrata]21045e-234
NP_180851 protein disulfide-isomerase A6 [Arabidopsis thaliana]20822e-231
NP_171990 protein disulfide-isomerase A6 [Arabidopsis thaliana]18052e-199
AAF40463 Strong simialrity to the disulfide isomerase precursor homolog T21L14.14 gi|2702281 from A. thaliana on BAC gb|AC003033 [Arabidopsis thaliana]18017e-199
XP_002892256 hypothetical protein ARALYDRAFT_470488 [Arabidopsis lyrata subsp. lyrata]17722e-195

Swiss-Prot top hits (Blast detail)Scoree value
Q5R6T1 Protein disulfide-isomerase A69455e-101
Q15084 Protein disulfide-isomerase A69439e-101
Q922R8 Protein disulfide-isomerase A69312e-099
Q63081 Protein disulfide-isomerase A69268e-099
Q11067 Probable protein disulfide-isomerase A66302e-064

TrEMBL top hits (Blast detail)Scoree value
O48773 At2g32920/T21L14.1420821e-231
Q9MAU6 Disulfide isomerase-related protein, putative18015e-199
B9IAL5 Predicted protein (Fragment)17281e-190
A9CPA7 Protein disulfide isomerase family17083e-188
C6T7D9 Putative uncharacterized protein17065e-188

Arabidopsis top hits (Blast detail)Scoree value
AT2G32920.1 ATPDIL2-3 (PDI-LIKE 2-3); protein disulfide isomerase20835e-234
AT1G04980.1 ATPDIL2-2 (PDI-LIKE 2-2); protein disulfide isomerase18067e-202
AT2G47470.1 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase2635e-023
AT2G47470.3 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase2635e-023
AT2G47470.4 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase2635e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
78  50%
 
112  13%
 
92  13%
 
102  13%
 
122  13%

Unigene MembersMember information