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Information for unigene UN19417

FASTA Sequence
Unigene ID: UN19417Length: 1235  SNP
GGGAAAGAAACTGAAAACTAAAAAGATTTTAGACAGAGGGAAGAAGAGAGGAGATTTCAGAGAAGAAGAATCTGTCTGGATACACT
GCAAATCATATCCGAGAAAAAACTTCTTTTTGATTATCTTGCTCGTACCTTCTTCTTTGTGACGACGATGATGGTAGTTAACAGCT
TCGATTTATGGCAAAAGGATGTTTTCTTCTCTGCAGCTGAAGAAGTACAAAAGTCTGCAGATATAATGGAATCTGCTTATAGATTG
TGGATTAGAGAGAAGAAAGATGACATCTTTAAGGAGCTTCAAGCAGCTTTGGGTACTGCTAAATGGCAGTTAGAGGAGTTTGAGAA
AGCAGTAAGATTGAGCCATAGACAGTGTGGGGATGATTCTACATCCACCACACGGCACAAACAGTTTGTTGCCGCTATAGAAAACC
AGATTCATCGCGTTGAAACCTCTGTCCAAGAAACTTACAGTGAGAATGGAAAAGAACCTCTCCGTTGGGTTAATCTCAGTGAAGAA
GAGCGAGACGACTTGGCCATGTTTCTCTCTGGATCTTCTTTAGCCTCACATAGCTTTAGTAGTGAGAGCAGCGTCAAGTCGAGTAT
AGCTGAAGTTACAGGTAACTGTAATGGCTCTGAATGTGTCATAGACATTCAAGAAAGCATAAAACCAAGAAATGCAGAGAAAACAG
CTGGGACAAGAAGGACATGGAGCTCACCAGATTTCAGTTCCTTGAGGATTATAGTTCCTGGTGAAAATGAACAAGAAGAGGAGAAA
CTAGTGACACAAATCGAAGCCACTCCTAAAGTGAAAGGAACTAAGTCCATATTGTGGATGCAGAGACTTCCTGATCATAATCAGCT
TGGTTGCTTCCAAAATCCGATACGCTTATCATTTAATCATCCCATCAAGCTCACTGTTTCCTTAATGCTAATAGTGTTTCTTCTAT
TACCCTTCGTAGTGTATTCATCTTGAGAATTCAACCATTGTTCTCAAGAAGCTTATCATCATTCCCCAAGATCAAGTAGAGATTAA
AGAGTGATTTACATTTAATTACTTTGTATTTGTTGCTTTGCTGTTCTTCAGGAAACATATAGAAAATCATAAACTTGTGACATTGA
TTAGAGTTTACACTTTGGTTTTGGCTCTCGTTTATGAAGAATGTAAATGTAAAATACGACGCTACATAGTTTTCAAGTATTTGTTG
TCTCTGCTCTTTTCTTTTTCTTTCCTTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179476 Syntaxin/t-SNARE family protein [Arabidopsis thaliana]6662e-067
AAD08955 unknown protein [Arabidopsis thaliana]6662e-067
XP_002886258 predicted protein [Arabidopsis lyrata subsp. lyrata]6618e-067
XP_002867360 hypothetical protein ARALYDRAFT_491727 [Arabidopsis lyrata subsp. lyrata]5685e-056
CAB52468 putative protein [Arabidopsis thaliana]5471e-053

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O64616 Putative uncharacterized protein At2g188606661e-067
Q501A1 At2g188606661e-067
Q944G8 AT4g30240/F9N11_905479e-054
Q9SUM0 Putative uncharacterized protein AT4g302405479e-054
A8MQE6 Uncharacterized protein At2g18860.25291e-051

Arabidopsis top hits (Blast detail)Scoree value
AT2G18860.1 syntaxin family protein6668e-070
AT4G30240.1 protein binding5475e-056
AT2G18860.2 syntaxin family protein5296e-054
AT1G27700.1 protein binding2097e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  31%
 
211  8%
 
106  46%
 
92  15%

Unigene MembersMember information