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Information for unigene UN19419

FASTA Sequence
Unigene ID: UN19419Length: 1481 SSR 
GGAGCTCTAGTGTATCTGCTGGCCGTTTCTGCTTCCATCTTCTCGAAACGTCTTCTCTGCCCTATCATCTTCTTCTTCTTCTTCCC
TAAGCTTAGCGAAGATGGCCGATGGTGAGGACATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGGTTTGCA
GGTGACGATGCCCCCAGAGCTGTGTTCCCAAGTATTGTTGGCCGTCCCAGACGCACTGGTGTCATGGTTGGGATGGGTCAGAAAGA
TGCTTACGTTGGTGATGAAGCTCAGTCCAAGAGAGGTATTCTCACTCTCAAGTATCCCATCGAGCACGGTATTGTGAGCAACTGGG
ATGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTGTTGCCCCTGAAGAGCACCCGGTTCTTCTCACTGGGGCA
CCTCTTAACCCTAAAGCTAACAGGGAGAAGATGACTCAGATCATGTTCGAGACTTTCAATGTCCCTGCCATGTATGTTGCTATCCA
GGCCGTTCTTTCTCTTTACGCTAGTGGGCGTACTACTGGTATTGTGCTCGACTCTGGTGATGGTGTGTCTCACACCGTGCCGATCT
ACGAGGGTTATGCTCTTCCTCACGCTATCCTCCGTCTCGATCTTGCGGGTAGGGATCTCACTGATTCTCTGACGAAGATTCTCACG
GAGAGAGGTTACATGTTCACCACCACCGCCGAGCGAGAAATAGTCCGTGACATTAAAGAGAAACTTGCTTACGTGGCTCTCGAGTA
CGAGCAAGAGCTGGAGACAGCTAAGAGCAGTTCTTCGGTGGAGAAGAACTACGAGCTACCTGATGGACAAGTCATCACCATTGGAG
CTGAAGGATTCCGTTGCCCTGAAGTACTCTTCCAGCCGTCGCTTGTCGGGATGGAAGCCCCTGGAATCCATGAGACGACATACAAC
TCCATCATGAAGTGCGACGTGGATATCAGGAAGGATCTGTATGGAAACATCGTGCTCAGTGGTGGTTCGACCATGTTCCCAGGAAT
CGCTGACCGTATGAGCAAGGAGATCACCGCGCTGGCACCAAGCAGCATGAAGATCAAGGTGGTTGCACCGCCTGAGAGGAAATACA
GTGTCTGGATTGGAGGATCTATCCTTGCATCCCTCAGCACTTTCCAACAGATGTGGATCTCGAAGGGAGAGTACGATGAGTCCGGT
CCATCCATCGTCCACAGGAAATGCTTCTAAGGTGTTTCTTCTCTCGTTCGTGGTGGTATGAGTTTGGTACGATCTCCCCTTGTTGA
GATGGGACTGAAACTATATGTTGTTATTGTGGTTGTTTTTTTTTTTTGTTCTCTTTAGAACCTTTTGGATGTTTCTCAAGTCTTTC
TATGTACTTTATTTTTATCTTTGTTTCTTATTTTCTCTTTAAGGATGCTTGTGATGATGCTCTGGTCCTTATTAAGCAAAAAAAAA
AGAAGTCATATTATATTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34498 unnamed protein product [Thellungiella halophila]19272e-213
NP_196543 actin 7 [Arabidopsis thaliana]19218e-213
AAD03741 actin [Brassica napus]19182e-212
AAW63030 actin [Isatis tinctoria]19128e-212
ADK62563 actin [Cicer arietinum]19128e-212

Swiss-Prot top hits (Blast detail)Scoree value
P53492 Actin-719213e-214
A2XNS1 Actin-318963e-211
Q10AZ4 Actin-318963e-211
P0C539 Actin-218821e-209
A3C6D7 Actin-218821e-209

TrEMBL top hits (Blast detail)Scoree value
Q9ZSD7 Actin19181e-212
Q5FZP3 Actin19126e-212
Q9XHH1 Actin19118e-212
B8Y645 Actin19101e-211
Q7XZJ2 Actin19101e-211

Arabidopsis top hits (Blast detail)Scoree value
AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton19222e-215
AT2G37620.1 ACT1 (ACTIN 1); structural constituent of cytoskeleton18693e-209
AT2G37620.2 ACT1 (ACTIN 1); structural constituent of cytoskeleton18693e-209
AT3G53750.1 ACT3 (actin 3); structural constituent of cytoskeleton18693e-209
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton18684e-209

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  43%
 
92  29%
 
61  14%
 
31  14%

Unigene MembersMember information