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Information for unigene UN19437

FASTA Sequence
Unigene ID: UN19437Length: 1268 SSRSNP
GGGATTTACTTTCGGAGTACTCAGCAGCTGCAGCAGGACGGTTTAACGTTTAATCTTCTTCCAGCGAATCGCCTTTGATTTCTATT
GTCCATCCCCTGATGTCTCCCAAAACCGCCAAGATAAGGCACAGATGCGTTGCTTGCTACAAGATGTTCAATAGACGCCAACACCT
TGTGGAGCACATGAAGATTTCTCACCATTCCCTTCATCAGCCTCGCTGTGGGGTTTGCTTCAAGCATTGTAAATCCTTCGAATCTG
TTCGGGAACACCTTAACGTTCCGGACCATCTATTCAAAGGTGACTGCAAGTCCATTTTCTCTGAACGAGGCTGTTCGCTCTGTCTT
CAAATCTTTGACGACGCCACTGCTCTGGCTCACCATCAAAACAAGTGTCTCCTCTCTCCACCTCTTCCTCTTCCTCTTGTCAATCC
TACTAGGACTCTTGGTGTAGTAAATTCACGTCTCAAGGCAGTGGCAATTGACTGTGAAATGGTTGGTGGTGGTGATGACGGGTCTA
TTGATCTCTGCGCATCTATTTGCCTCGTTGACGAAGACGAGCATGTCATCTTTTCTACTCACGTCCAGCCCCAACTCCCTGTCACC
GATTACAGACACAAGGTAACTGGACTGACCGAAGAAGATTTGAAGAATGGTATGCGGCTTCAGGATGTACGAGAAAAAGTTTTAAC
CATCTTGTGCGGTGGACATAATGATGGGGTTGGGAGGCTTCTTCTTGTTGGTCATGACCTTAGACATGATATGAAATGCTTGAAAC
TCCAGTATCCTAGCCATCTGTTGAGAGACACAGCAAAATACGTGCCATTGATGAAAACAAATCTTGTAAGCCAATCACTCAAGTAC
CTCACAAGGTCATATTTCGGATACAAGATACAATGCGGGAAGCACGAGCCGTACGAGGACTGCGTATCTGTGATGAGGCTGTACAA
GAAAATGCGGGATCAAGAGCATGGAAAGGGAGAAAAAGAAGAAGAAGAAGGGGATGGACTGAACTCGTGGAAACAGAGCGATCTAG
AGAAGATGAAGCCGGAAGAGCTGTACCACAACTCCACATCAGAGTACCGCTGCTGGTGCCTTGACCGCCGTTGAAATCTAAGTTCC
TCTCATAAATAGCTCCTCTTTTGATGTAACTCATTTTCTTAGGAAAAAAAAAAGCTCTGGGTGTTTTTTGGGAAACTGATTCTAAA
CGATGATAACAACAGCTCTCTCCTCTGCTTTAGGAACTTGTATAATAAAAAATGATTTAGGCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880342 hypothetical protein ARALYDRAFT_484002 [Arabidopsis lyrata subsp. lyrata]14361e-156
AAM62781 putative exonuclease [Arabidopsis thaliana]13948e-152
NP_566124 exonuclease-like protein [Arabidopsis thaliana]13912e-151
ACJ84412 unknown [Medicago truncatula]9933e-105
ACU21204 unknown [Glycine max]9906e-105

Swiss-Prot top hits (Blast detail)Scoree value
Q9GZR2 RNA exonuclease 42591e-021
Q6DEW6 RNA exonuclease 42591e-021
Q6PAQ4 RNA exonuclease 42563e-021
Q91560 RNA exonuclease 42483e-020
Q7S9B7 RNA exonuclease 42456e-020

TrEMBL top hits (Blast detail)Scoree value
Q8LE91 Putative exonuclease13945e-152
Q9ZU79 Expressed protein13911e-151
B7FI33 Putative uncharacterized protein9932e-105
C6THA2 Putative uncharacterized protein9904e-105
B9DFN1 AT2G48100 protein (Fragment)9806e-104

Arabidopsis top hits (Blast detail)Scoree value
AT2G48100.1 exonuclease family protein13917e-154
AT2G48100.2 exonuclease family protein13917e-154
AT2G48100.3 exonuclease family protein13917e-154
AT2G48100.4 exonuclease family protein9696e-105
AT3G27970.1 exonuclease/ nucleic acid binding / zinc ion binding8253e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  9%
 
97  64%
 
82  18%
 
101  9%

Unigene MembersMember information