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Information for unigene UN19445
| FASTA Sequence |
| Unigene ID: UN19445 | Length: 1319 |
SSR | | GATTCAAAAGGGAGTTGTTTAATTATACCCAATAGTTTTTCAGGGTTTCCATTTAAAAAGACAAAAGCAACAAGACACCTATCTCT
CTGCATTCCATGACCACACCAAATCTATGTATTATATAATGCAATCCCACCAAAGAGACCGCAGCAGCAAGTAAAGAATCAAGGGT
GTGTTTAGAGAAGCTGAAAACCCGATCAGATCACTCCTGTTGCTTCTTCTTCTTTGGCCGCCTCTTCCTCTTGGGTTTATGAGCAT
CAGAATTGGAGCTCAAGTTGCTACTCTGACTGCTATATGAAGTTGCAGCAGCATCCCTGGCGGCCAAAGTTGCGGTAGCACCCCTG
GCATTATATGAAGTTGCGGAAGCACCCCTGGCATTATATGAAGACTCACTTCTTCTGTTTGAAGTGTTTCTCGAGGATGATGGCAT
CTCGTTCCTCTGCATAGACGAGTTCTTCCTATGATTTGAACCAAATCTTGCCTGTGGTGGTGGCATTAAAGCCCTAGCAGAGTTTT
GTTTCTGGTTCCTTTCATCACTAGACATGCCAGATGTTGGTCTACTAGAAGCAGCTTCCTTTGTGCTTTTATCGGTCAATTCATCA
TCTGCGTCTGCTTCATCGCTTGAGCTCCCTTTGTCAAAGAAATCATCATCACTAAGGTCCAGAAGACCATCATCTTCACTCCCTGT
CTCTTCCAACTCTTTCCCACTAGCAGCAGCAACAATAATATTGGCTTTGATCTGCTTCCGCATCTTACTTCTTCGCTCAATCACTT
CTGAGTCCTCAGCACCAGTAAACAGAGATACATACTTCTCATTTTTGGGGAAGAACCTAACATATTCAAGATCTTCCTTGAGTTTA
CTGAGTTGCTCAGATATATCTGCATCTCCCACATGAGCAGATGAAGTACGCTGTAGCTTCTCAAGCCTCCTGATGCTCCTTTCAAT
CTTTCTCCTCTCAAAGAACTTAATCTTTCTGTTCCTGAGGAATATTTTACGTTCAACAGCAAGACGTGTATGGTCATCTTGCTGCT
TCTTCAAATACTCCAACTTCTGTTTAAGAGTCTCTTTTACTTCAGGAGGCAAATCTTTACGAAGAAAGCGTTCGACGGAACGCATC
TGGTTCTTCAGAGAGACGATCTTAGGTTTCTTCTCCACGCGTAATGCTTTCGACCTCCTGCTGCTGCTTCCTGACGCTTGATTGGG
TTCTGAAACCCTTCTCTTGGCATAGCCGCCGTGCGCCATGGCCGCAAGGACTTACGAAAGCTTTCAAGGAGAGAGAGAAAGAGAGA
GAGAGAGAGTCTACACACACAAATATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB11299 unnamed protein product [Arabidopsis thaliana] | 1279 | 2e-138 |
| NP_568627 uncharacterized protein [Arabidopsis thaliana] | 1279 | 2e-138 |
| XP_002863064 hypothetical protein ARALYDRAFT_497180 [Arabidopsis lyrata subsp. lyrata] | 1267 | 4e-137 |
| AAM61250 unknown [Arabidopsis thaliana] | 1252 | 2e-135 |
| XP_002889498 hypothetical protein ARALYDRAFT_470399 [Arabidopsis lyrata subsp. lyrata] | 1057 | 1e-112 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q09867 rRNA-processing protein efg1 | 160 | 4e-010 |
| Q6CFG6 rRNA-processing protein EFG1 | 156 | 1e-009 |
| Q5K724 rRNA-processing protein EFG1 | 146 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q67YA7 At5g43720 | 1279 | 1e-138 |
| Q9FG92 Genomic DNA, chromosome 5, P1 clone:MQD19 | 1279 | 1e-138 |
| Q8LFR5 Putative uncharacterized protein | 1257 | 4e-136 |
| A5BK56 Putative uncharacterized protein | 1042 | 4e-111 |
| B9RTF8 Putative uncharacterized protein | 1041 | 5e-111 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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