RadishBase

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Information for unigene UN19447

FASTA Sequence

Unigene ID: UN19447	Length: 1132	SSR
TTTTTCTTTTTCTTTTCTCTTCCAAAAAATTTCCTCTGATTTCTAACCCCTCTCTCTCTCTCTCTCTCTCTCTAATGGCGGCGACG ATGAGCAGAGACCAATACGTCTACATGGCGAAACTCGCCGAGCAAGCGGAGCGTTACGAAGAGATGGTCCAGTTCATGGAAAGTCT CGTGACCTCCTCCACACCGTCCAGCGAGCTCACCGTAGAGGAGAGGAACCTTCTCTCCGTGGCTTACAAGAACGTGATCGGATCTC TTCGTGCGGCGTGGAGGATCGTGTCGTCGATCGAGCAGAAGAAGAGAGCAGGAAGAACGAGGAACACGTGTCGCTCGTCAAGGACT ACAGATCTAAGGTCGAGACGGAGCTCTCCACGATCTGCACGGGGATCCTCAGGCTGCTCGACACGCATCTGATCCCTTCGGCTACC GCTAGCGAGTCCAAGGTGTTTTACTTGAAGATGAAGGGTGATTACCATCGGTACATGGCTGAGTTCAAATCTGGTGACGAGAGGAA GACAGCTGCTGAAGATACTATGATCGCTTACAAGGCTGCTCAGGACGTTGCGGTTGCTGATCTAGCGCCTACGCATCCGATCAGGC TGGGACTGGCTCTGAACTTCTCGGTGTTTTACTACGAGATTCTCAACTCTTCGGAGAAAGCTTGTAGCATGGCCAAACAGGCTTTT GAGGAAGCTATTGCGGAGCTGGACACGTTGGGAGAGGAGTCATACAAAGACAGTACTCTCATCATGCAGTTGCTAAGGGACAATCT AACCCTCTGGACTTCCGATATGCAGGAGCAGATGGATGAGGCCTGAAGATCTTATGGAAGAACGTACGCTTATGTAATGTCCTCAC AACCGTGACTGAGTTCAAAAACCCAAAAAAAAAAAACCTTTGCTCTAAAACTTGTCGAAACAAAAAAATGTGTGTTTATGACAGAG CATGTGCACAGCTTTGGTGTTATCTGCTGCTCTGTTCCAACTCTGTTTTTCTTTTTCTTAGCTTCTTTTGTACACAGTAATTTATA TATTGCAAACTATTTAGTGTCCCCATCTTAGCTGGGAGAGTCTCAAGACTGTCAAACCTTACAGTCTTTTAAACTCTCCAATGCTG TGATGAACGCTACC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_851274 14-3-3-like protein GF14 kappa [Arabidopsis thaliana]	868	7e-091
XP_002866671 hypothetical protein ARALYDRAFT_496774 [Arabidopsis lyrata subsp. lyrata]	864	2e-090
AAA79700 GF14 Kappa isoform [Arabidopsis thaliana]	853	4e-089
ADO95308 14-3-3-like protein GF14 Lambda [Eutrema salsugineum]	840	1e-087
XP_002873459 hypothetical protein ARALYDRAFT_909000 [Arabidopsis lyrata subsp. lyrata]	839	2e-087

Swiss-Prot top hits (Blast detail)	Score	e value
P48348 14-3-3-like protein GF14 kappa	868	3e-092
P48349 14-3-3-like protein GF14 lambda	838	9e-089
P93206 14-3-3 protein 1	791	2e-083
O49996 14-3-3-like protein D	789	4e-083
Q96451 14-3-3-like protein B (Fragment)	762	6e-080

TrEMBL top hits (Blast detail)	Score	e value
Q9AT79 GF14 lambda (Fragment)	808	4e-084
C0KJL1 1433-4	803	2e-083
P93787 14-3-3 protein	793	2e-082
B9RJU7 14-3-3 protein, putative	792	3e-082
A5AX75 Putative uncharacterized protein	790	5e-082

Arabidopsis top hits (Blast detail)	Score	e value
AT5G65430.1 GRF8 (GENERAL REGULATORY FACTOR 8); protein binding / protein phosphorylated amino acid binding	869	2e-093
AT5G65430.2 GRF8 (GENERAL REGULATORY FACTOR 8); protein binding / protein phosphorylated amino acid binding	841	3e-090
AT5G10450.1 GRF6 (G-box regulating factor 6); protein binding / protein phosphorylated amino acid binding	839	6e-090
AT5G10450.2 GRF6 (G-box regulating factor 6); protein binding / protein phosphorylated amino acid binding	811	1e-086
AT5G16050.1 GRF5 (GENERAL REGULATORY FACTOR 5); ATP binding / protein binding / protein phosphorylated amino acid binding	728	4e-077

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	1			25%


9	2			50%


20	1			25%

Unigene Members	Member information