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Information for unigene UN19451

FASTA Sequence
Unigene ID: UN19451Length: 1285 SSR 
GGCTCTCATGCCTTTTAGTTTCTCCCCCTTCAAAACCATTTTTCCATGGCGGAGAAGAAGAAGAACAACATCTGCAAACCGAAACC
CTAAAAAAGAAAAATTCGAAAATGGAGGAATCGAATCAACAACACCAGCTCTTCCTCCAAATGCAGCAGCAGCAACAAATGCAGCA
GCGTCAGCAACAGCTCTTTCTGATGCAGCATCTCCAGAGACAACAACAGCAACAACAACAACAGGCGGCCGCCATGTCGAGGCTCC
CCTCGAATACTACCAACAACTCTCATCTTCTCGCTCCTCCCGGTTTAATCCAGAACCGACCCGTTAACCCGTCTTTTCTAAACCCT
CAACAGAGGCCGATGATGATGACGATGATGACGCAACCACAACAACAACAGCAGCAACAAGAGAAGAAGCCGCCGATGATGCGTGC
GTTGAATCAAACGGAGTTACAGTTCGCTTACCAAGACGCTTGGCGTGTCTGCCATCCTGATTTCAAGCGACCTTTCGCTTCTCTCG
AAGACGCTTGCGAAAGGTTGTTACCTTATCACGTCGTAGCAGACTACGAAGCAGAAGAAGACGAGATGATCCTCCATTCAGACACA
ACAACAACAACAAGCCAGACGGTGTCTCGGAGTCAGCAATGGGACGACAACATTGCAGACAAAGTGGGCGAGTTCACGGAGACGTT
TGAGAAGCAAGTCGAAGCTTTCAACGCTATAACTCAGAAGAGGAGGGGTGGTGAGTTGAGAACCGAGGAGAGGTTGGTTGTTGAGC
AGCTTTTGCTCGTGGATGAGAGGAATGCGTGTATTGAGGTGAAGTCTGAGCTGGATAGAGAGATGAAGGCTCATGAGGCGAGGTTG
AGAATGGCGGCTATGGCTCAAGTTGGACAAGTGATGGGTCATAATCCGTTGAGAGGTAATGCGTTTGGGAACTTTGGAGAACAACA
GCAGCAACAGGGACGGTACATGAACCCTGATGAGATGATGATGAGGATGCGTGGTTTTATGAATAGTAATAATAGTCAGAGAGAAG
ATAAGGAGCCAGTAGAAGACTTCTTGAATGATGAAGAAACTGGTCGACATGGGAACTGGAGAGGGAATGGTGAATTTGATTTGAAT
ACTCGGTAAAAAAATGGAACAGAGAGGTTAAACTTTTTTTTCTTTTTGATGAGTTCGATACTTTGCAGACTTGTAGTTAAAACTTG
AAAGGTAGTGAGTGAGGGATAAGGTGTTTATTCTTCTTGACTTTGGTTAATAAAATTTACCGTAATAAAATGATACTGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_186996 uncharacterized protein [Arabidopsis thaliana]10174e-108
NP_197253 uncharacterized protein [Arabidopsis thaliana]9611e-101
XP_002873833 hypothetical protein ARALYDRAFT_488617 [Arabidopsis lyrata subsp. lyrata]9521e-100
XP_002884381 hypothetical protein ARALYDRAFT_896349 [Arabidopsis lyrata subsp. lyrata]8321e-086
XP_002267090 PREDICTED: hypothetical protein [Vitis vinifera]8222e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q54WV0 Nuclear transcription factor Y subunit beta1802e-012
Q552X2 Putative mediator of RNA polymerase II transcription subunit 261712e-011
Q556Q3 Probable serine/threonine-protein kinase irlF1703e-011
Q55F68 Adenylate cyclase, terminal-differentiation specific1694e-011
Q54XG7 Basic-leucine zipper transcription factor A1596e-010

TrEMBL top hits (Blast detail)Scoree value
Q9SRQ0 Putative uncharacterized protein10173e-108
Q9LF51 Glutamine-rich protein9619e-102
B9I726 Predicted protein7942e-082
B6T607 Putative uncharacterized protein6373e-064
C5YNK3 Putative uncharacterized protein Sb08g0131806169e-062

Arabidopsis top hits (Blast detail)Scoree value
AT3G03460.1 unknown protein10181e-110
AT5G17510.1 unknown protein9624e-104
AT1G25540.1 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1425e-009
AT1G25540.2 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1425e-009
AT4G32551.1 LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor1335e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  40%
 
82  40%
 
191  20%

Unigene MembersMember information