RadishBase

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Information for unigene UN19455

FASTA Sequence

Unigene ID: UN19455	Length: 798		SNP
GAAAGTAGAAAAACGATATTGATCCGAACATATATCACATGCTTTATACTTTTATTAAAGACAAACATAATACACTTTAACAAACA AGAAAGTAGAATACGTGCATATATAATACAGCACTTCCATTTCACAAGTCACTCATATATATTATACACTCGTTATTTATTGAACT TTTTATTACTGAAATCAACTTGCTTCAACCATGCACACAAGTACTGATAGGAGAGTCGCGCGAGGAGTACTCTCCTCTATTCCTCA GACAAGAGATGTTCGTCGATCTCTTTGGAGACTTCAACGCAGAACTGGAGGAGAGTCTCGGGATGAGCAACCAAGTCGCTAATCTT CTCATACTCAAGGTGCCAGTGCACAATACTCCCTGGCCCTCCGTGCTTAGGAGTCACCTGGATCGTGATCACGAAGCTTTTGTACT CTTTCATCAGATCACCTTCTATAACCCTGAACGTGATCAAGTTCTTATCCGGCTCCACTGCCTCGATTCTCTCCTTGGCCACCTTT GCCTCCCCATCATGAAAGTAGTTCCAGTAGACGATAGAGCCGACCTTGCCCCAGTCACCTTCGTGCAGATCACAACCTTTAATCTT GCCTGGAGATGCTTTGGAGACATGGTGTGGTCTCCCGGCGAACATGTGATGAAACTGTCCAGCCGAAGCTTTGATCTCCACGTCTG TCTCAAGCTTCCCGACCATAGTAGACGCCTTGGTTATTGCCGCCTCAGCCATTTTTTCTACCTCTGATAATGCTTATCTTGAGTAA AAATGGGATATGAGAGAGGAGTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_850976 MLP-like protein 34 [Arabidopsis thaliana]	767	2e-079
NP_565003 MLP-like protein 34 [Arabidopsis thaliana]	767	2e-079
XP_002888799 predicted protein [Arabidopsis lyrata subsp. lyrata]	762	7e-079
NP_849875 MLP-like protein 28 [Arabidopsis thaliana]	760	1e-078
NP_177240 MLP-like protein 28 [Arabidopsis thaliana]	760	1e-078

Swiss-Prot top hits (Blast detail)	Score	e value
Q9SSK7 MLP-like protein 34	767	9e-081
Q9SSK9 MLP-like protein 28	760	6e-080
Q941R6 MLP-like protein 31	753	4e-079
Q9SSK5 MLP-like protein 43	658	4e-068
Q9C7I7 MLP-like protein 165	421	1e-040

TrEMBL top hits (Blast detail)	Score	e value
Q0WLG8 Putative uncharacterized protein At1g70850	767	1e-079
Q3ECE5 Putative uncharacterized protein At1g70850.2	767	1e-079
A8MRH3 Uncharacterized protein At1g70830.3	760	9e-079
B3H4F3 Uncharacterized protein At1g70830.5	760	9e-079
Q3E7W3 Putative uncharacterized protein At1g70830.2	760	9e-079

Arabidopsis top hits (Blast detail)	Score	e value
AT1G70850.1 MLP34 (MLP-LIKE PROTEIN 34)	767	8e-082
AT1G70850.2 MLP34 (MLP-LIKE PROTEIN 34)	767	8e-082
AT1G70850.3 MLP34 (MLP-LIKE PROTEIN 34)	767	8e-082
AT1G70830.5 MLP28 (MLP-LIKE PROTEIN 28)	761	4e-081
AT1G70830.2 MLP28 (MLP-LIKE PROTEIN 28)	760	5e-081

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	4			25%


7	3			19%


12	5			31%


20	3			19%


8	1			6%

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