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Information for unigene UN19465

FASTA Sequence
Unigene ID: UN19465Length: 1354  SNP
CGCATATTGACATGCCGAGCTGGCTAAGAAACCTAAACTCTTACTTGCCTTCTTGTCACAGCATTTCTTGAGGTAAGTAGCAAGAG
TTCGCTGCTCCAACACTTGTTACAACCGTCAACCGAGACTGATGTATCTAAACAATGCAAAAAAAAGCTGAAATATTGTCAACAGA
ATGAAGACAGAAACATAAACAAATCTGGAACTGCGAAAACTATGAAATATTGATTTTGGTCTCTAAAATTTTTGAAAGGATTTTAT
ATAGATAAGTGTCTCTAAAATTATTTTTAAAAAGTTTTTTTTTTTACAAAAGTTAAAAAAAAAAACATTTTAGGCCCCTAAATTTT
AGATTTGGCCAAAGCTTTGCACTGTTAGAAGAAAAACAAATCTAATAGATTTTACGTTGTAAACCTTCAAGTTTATTTTTATATTT
TGTTGGAATTATCAAATAAGCCCCTATTCTTTGTTGTCTGTTTCTTTCTTAACCCGAATAATTTAGTCGCTTCGACGAGAACTCAC
CTTTAGAAGCTTGAACCCTAAACCCCTCTCCCGATCCAGTTTCAGAATCCGGACCTGGTTCGGTGCCTTTGTCGAGACATGAGATG
GCTGAGATATCTAAACCAATGGCGTGGAACCGCGAAGGAAGCATTCGAGCAAGTATCAATTGTAGCCAAGTTTCTCTGTTTGATCC
ACGTCACCGATCGTTACATAATCTCATCCACTCATGTTCAAGGTCCTAGCATGCTTCCGACGCTTAACCTCACGGGGGATGTCATT
TTAGCGGAACATTTATCGCACCGGTTCGGTAAGATTGGTCTCGGTGACATTGTGTTGGTTCGATCTCCGACTGACCCGACTAGGAT
GGTGACGAAGAGGATCTTGGGTTTAGAAGGGCATAGACTCTCTTTCTCTGCTGACCCATTGCTTGGTGATAGCTCCGTCAGCGTTG
TGGTTCCAAAAGGCCATGTTTGGATTCAGGGAGATAACTTGTATGCTTCAACTGATTCGCGTAATTTCGGACCTGTACCTTACAAT
CTCATCGAAGGAAAAGCTCTTCTTCGTGTCTGGCCACCACGGTTCTTTGGGTCATTGAGGTGACGATCACAATCCGGCTTGTTTCC
CTTTCAGTTGTTTTTGCAGTAGGATGTGTGTAACTCCAGCGGTTTTATTGCAATGTTGATCATACTCATTAGAGTAATGTTATGTA
TCAATCGGATTTAGATAAAGCCACAGAAGTGGGATAAATATTAGAGGAAGCCATGGACCTGACTTTGTTTTATACCTGAAGCTACG
TTAAGATTCATTTTGTAAGATCTAAAAAGTTGGTGAGATTTTGGTTGATAATTGGCATTGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175758 peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana]7764e-080
XP_002891755 signal peptidase I family protein [Arabidopsis lyrata subsp. lyrata]7747e-080
XP_002300443 predicted protein [Populus trichocarpa]5722e-056
XP_002300441 predicted protein [Populus trichocarpa]5685e-056
NP_001077712 peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana]5642e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9CQU8 Mitochondrial inner membrane protease subunit 13155e-028
Q96LU5 Mitochondrial inner membrane protease subunit 13111e-027
Q28I39 Mitochondrial inner membrane protease subunit 13022e-026
O74800 Mitochondrial inner membrane protease subunit 12691e-022
P46972 Mitochondrial inner membrane protease subunit 22133e-016

TrEMBL top hits (Blast detail)Scoree value
Q6NLT8 At1g535307763e-080
B9GGY8 Predicted protein (Fragment)5721e-056
B9GGY6 Predicted protein5684e-056
A8MQR7 Uncharacterized protein At1g53530.25641e-055
A9PAC0 Predicted protein4922e-047

Arabidopsis top hits (Blast detail)Scoree value
AT1G53530.1 signal peptidase I family protein7771e-082
AT1G53530.2 signal peptidase I family protein5654e-058
AT1G29960.1 peptidase/ serine-type peptidase3934e-038
AT1G23465.1 signal peptidase-related3844e-037
AT2G30440.1 chloroplast thylakoidal processing peptidase1202e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  13%
 
102  25%
 
92  25%
 
63  38%

Unigene MembersMember information