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Information for unigene UN19474

FASTA Sequence
Unigene ID: UN19474Length: 1372  SNP
ATATATATATGTTTAATTTCTTTCAATTTCAATTCATGTGATTAGGAACTCCAAACCAACAAACAAATTGCGGTTCACATTAGCAA
TAACACAAAAAGGTAAGATACGCTCTGCGGTTGTATTTTCATGTATTCCGTGATGAAATCACCAGTGGCATGCATGCATGTTTATC
ACCGATCATGTTCCGACTCATTCACATTCAAAATCCGAACTGTATTTATCTACTTTAATTTGAAAAAGGAAAGGGACTAATTTGGA
GGATATTAGAATAGAATAAAGCAAATCAGGTGCTAAAACGTGTTCTTGTGGGAAAATTGAGACGCCAAAGCATAACCTTGGAACAG
TCTTGCGCCGGAAGTCCCTTCAACTTTGTATCGTCCTCCAAAACCACTTGCTTCACATATTTAATCGAATCCTGTTTGGTCCCTTC
AACAGAAGAAGGACGACCCCATCTTTCAGGGTCCCAAAGTATGGAACTATTGAAAGCAAAGCTTGATATATGAACCGGAGGCTTTG
TCTCCGTCTCGTTATTAATTTTTCTCAAATGCCACCCCAATACTTGTGAAGATTCACAAACCGGCCCCTCTACTATCACTCGTTTC
CTATTAGCTGATAGCAACGCCATTGGCCACGTCCCGAATACCTCGATATCTCTAATCTCGTCGAAAAATTCAAGATCATAGATGTT
GTTGAGTCCCGCGAAATGAACTATTCCGCTTAATTTGTGATGCTCAATGTGTCTCAACGCTAGGTTTCTCTGATGATCAAGCTCTG
ATTCCGAGCTCGTGAAGTTCTCCTTGAAGACTATACGTCTATACATTAAACCAGTCTTTCTTAACATCGTAGATGAAGAGTTCACG
TCAGCTTCCGAGTGTTTCTCCACGACTATCCACAGTAAAGGAGGCGGAACTAGCCTCAGAGTGTTGGCCATTCTCCTTAGAAGAAC
GTTTTTGTAGCGATCTTTGGTCATTACTGGAGTTACAACAATCACTAGACCTCTTGGTGTAACTTCCTCTTCTGTCTCGGAGAGCG
ATCTGTTTTCTGGTTCAGCTTCTCGTGACTCTGAAGGAGCAGGGGCTTGGCCTTGGGAAGTGACCAAAGCTTTATCAACGAGGGAA
TTGGGTGTATAGGTAGAGTTCTCAAAAGTTTGGGGAGGAATCTGAGATTTGGAGGTAGTAGAGGCGGTGGTTTCGAAATTAGAGAA
AAGTGAGGCCTTACCAGCTGGAGCAAAGCCAGTGAAGAAACCCATTACAAAACATAGAGAGAAATGGATCACAGCTTTCTTCCATA
TTTGAGTTTTCTTCTTTGATCTCTCCAGAGATCCCATCTAAGAAAGAGTGTTTCTTGAGTGATTTTCCTTTTTATTTTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181246 nucleotide-diphospho-sugar transferases-like protein [Arabidopsis thaliana]16062e-176
XP_002881489 hypothetical protein ARALYDRAFT_902844 [Arabidopsis lyrata subsp. lyrata]15992e-175
XP_002323456 glycosyl transferase [Populus trichocarpa]12012e-129
AAX33319 secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides]11932e-128
ABP65661 secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba]11887e-128

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZQC6 At2g3709016062e-176
B9IJ10 Glycosyl transferase12011e-129
Q5BMA1 Secondary cell wall-related glycosyltransferase family 4311931e-128
A4ZYQ8 Secondary wall-associated glycosyltransferase family 43B11885e-128
Q50HW0 Glycosyltransferase11652e-125

Arabidopsis top hits (Blast detail)Scoree value
AT2G37090.1 IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase16077e-179
AT1G27600.1 glycosyl transferase family 43 protein5162e-052
AT1G27600.2 glycosyl transferase family 43 protein5162e-052
AT4G36890.1 IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase1552e-010
AT5G67230.1 glycosyl transferase family 43 protein1533e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  20%
 
82  20%
 
124  40%
 
102  20%

Unigene MembersMember information