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Information for unigene UN19491

FASTA Sequence
Unigene ID: UN19491Length: 1014  SNP
GGACGTATTCACATCTTCAGAACGAATCTCTCTCATCGTCACGTAGGACAGACAGACAGTCTCCATTCCATCTCTTCGACTCCTGC
CGTGCTTCTCATCAGTGACTGAGCGAAAAATGGAGAAGAACTTGGAGGATTTGAGAATTGTGGGGGAGCAATGGTTGAATCAAGGA
ACTGAATTTGTTCAACAGATACCACAGGATCAGCTTTATGCTGCTGTTGGTGTTCTGTTATTAACTACCATCTTCTTGCTCTTCTT
CTTCTCTATTCGCTTGTTCAGACGTACGAAGGCCAATACTGTACTCCTCTCTGGCCTAAGCGGAAGTGGCAAAACCGTTCTCTTCT
ATCAACTCCGAGATGGATCTTCTCATCAGGGCTCTGTGACGTCAATGGAACCTAACGAAGGCACCTTTGTGCTCCACACTGAAAAC
ACTAATAAAACGAAGCCCGTTCATCTTGTTGATGTTCCTGGGCACTCTCGGCTTAGATCTAAGCTAGAAGAGTACTTGCCACGAGC
AGCCGCTATTGTGTTTGTAGTAGATGCACTTGAGTTCCTCCCTAATTGTCGTGCAGCTTCAGAGTACCTCTACGACATTCTTACCA
ATGCAAGCGTGGTTAAGAATAAGATCCCAGTCCTGCTTTGCTGTAACAAGACTGATAAAATAACTGCACACACAAAGGAGTTCATC
CGCAAGCAGATGGAGAAAGAAATAGAGAAACTTAGGTTTTCGAGGAGTGCGGTTTCAACTGCTGACATAGCCAATGACTTTACTCT
TGGGATTGAAGGAGAAGTGTTTTCCTTTTCGCATTGCTTAAACAAGGTCACTGTCGCTGAAGCATCTGGACTAACTGGAGAAACAG
AGCAAGTGCAAGAGTTCATCAGAGAATATGTTAAGCCATGAAGAGCTGAAATGTGTGAGCATTAAGCATACACTTAAAGTCTTTTA
TGTACATGAATTTAAGATTTGTGATAATATTGTCGGAGGATTTTGGATATTGAAATCGTGTTAGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886264 signal recognition particle binding protein [Arabidopsis lyrata subsp. lyrata]11356e-122
NP_179467 P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana]11241e-120
BAE99974 putative signal recognition particle receptor beta subunit [Arabidopsis thaliana]11232e-120
XP_002873217 signal recognition particle binding protein [Arabidopsis lyrata subsp. lyrata]11213e-120
AAU44447 hypothetical protein AT2G18770 [Arabidopsis thaliana]11194e-120

Swiss-Prot top hits (Blast detail)Scoree value
P47758 Signal recognition particle receptor subunit beta2884e-025
Q9Y5M8 Signal recognition particle receptor subunit beta2841e-024
Q4FZX7 Signal recognition particle receptor subunit beta2832e-024
Q54XX1 Signal recognition particle receptor subunit beta2822e-024

TrEMBL top hits (Blast detail)Scoree value
Q9ZV42 Putative signal recognition particle receptor beta subunit11248e-121
Q0WSC4 Putative signal recognition particle receptor beta subunit11231e-120
Q5XVE5 Putative uncharacterized protein11193e-120
Q9FFK7 AT5G05670 protein11122e-119
B9SHC8 Signal recognition particle receptor subunit beta, putative10047e-107

Arabidopsis top hits (Blast detail)Scoree value
AT2G18770.1 signal recognition particle binding11253e-123
AT5G05670.2 signal recognition particle binding11139e-122
AT5G05670.1 signal recognition particle binding11139e-122
AT3G49870.1 ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding1316e-008
AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding1262e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  24%
 
114  24%
 
63  18%
 
122  12%
 
94  24%

Unigene MembersMember information