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Information for unigene UN19513

FASTA Sequence
Unigene ID: UN19513Length: 949  SNP
GCGAGAAATGTTGTTTTTTATTGGCGAACGCGTCAGTTAAAATAATGATATTGATTTAAGTACATTGATAGGAAACGGTCATTTTA
AAAATCAAAGTAACAAATATTTTATTTGTTCATAAACGAAATGAAATTGAGACATATGAACATAAACATATAAACTCAAATACGAG
CATAAACATATAAAACGTCGTAATATGTAAACCTCTCAAATATCTATGAAATTTGACCGCAGTTGTGGATCACAGCAACGGGTACG
GAAGTTTCCGTGCTCAAAGCCATAATGCTCGTGACTATATCCATTCCTTGAACGACTTGGCCGAACACAACACACTCGTCATCCAG
ATCCGGGTTCGCCTGCGCGTGGATCATGAACTGAGATCCGGTGCTGTTTCGACCACGGTTCCACATGGAGAGGATACCTGGACCGG
TGTGCTTCTTGATGAAGTTCTCAACCTCGAAAAACCTACTGTCGTAGATACATTCGCCTCCGTTTCCTTTCCCTCCGTCAATGATA
TCTCCTCCTTGGATCATATAACCTGGGTCAACATGGTGGATGATCGATCCTTTGTAATGGAGTGGCTTACCAAGCTTCCCCATGCC
TTTCTCGCCTGTACAGAGGGCGCGAAAGTTCTCTGCCGTCCGTGGGGTCGTGTCGGCAAAGAGTTCCATTATGATCATACCAGCTG
GTTTGCCGTCCACGGTCATATAAAAGTAAACCTTAGGGTTAGCCCGAGGAGGTACAGGGGTTCCATCAATGGCTGGAGGTGGTATG
AGTGGACCAACAGGGTTAACGTTAATTGTGCACACACCACCAGCCGCAACGTTAACTGTGATGTTTCTGTCGGTTTCATTGATGCG
AGAATTAATTTCCATTTTCAGAGAAATTTAGGGCTGTTTCTGCGAAGAGATGAACTGATTCCAAGCAGTTCAGATGGAAGAATGGT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883469 hypothetical protein ARALYDRAFT_898931 [Arabidopsis lyrata subsp. lyrata]5478e-054
XP_002885442 hypothetical protein ARALYDRAFT_898595 [Arabidopsis lyrata subsp. lyrata]5334e-052
XP_002862349 hypothetical protein ARALYDRAFT_333373 [Arabidopsis lyrata subsp. lyrata]5244e-051
AAR27291 cyclophilin [Eutrema halophilum]5235e-051
ABK96400 unknown [Populus trichocarpa x Populus deltoides]5227e-051

Swiss-Prot top hits (Blast detail)Scoree value
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-15161e-051
Q39613 Peptidyl-prolyl cis-trans isomerase5116e-051
P21568 Peptidyl-prolyl cis-trans isomerase5107e-051
P34790 Peptidyl-prolyl cis-trans isomerase CYP18-35018e-050
Q42406 Peptidyl-prolyl cis-trans isomerase CYP18-44963e-049

TrEMBL top hits (Blast detail)Scoree value
Q6TMX3 Peptidyl-prolyl cis-trans isomerase5234e-051
A9PJ47 Peptidyl-prolyl cis-trans isomerase5225e-051
D0ELH5 Peptidyl-prolyl cis-trans isomerase5225e-051
A9P9C8 Peptidyl-prolyl cis-trans isomerase5216e-051
Q8VX73 Peptidyl-prolyl cis-trans isomerase5208e-051

Arabidopsis top hits (Blast detail)Scoree value
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase5171e-052
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase5026e-051
AT4G34870.1 ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase4972e-050
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase4873e-049
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase4506e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  40%
 
72  20%
 
94  40%

Unigene MembersMember information