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Information for unigene UN19514
| FASTA Sequence |
| Unigene ID: UN19514 | Length: 1061 |
| SNP | GCAGCATATAATGATATAACTAAATTAAAATTAAAATATTCAAGAAGACAAGTAACAATAATTACAATCATCACCAAATCCTCACG
CCAACACAAACAAACAAATGCAAATGCCACCAGACTTAACCACTAAAACCCATCTCCTTTTGGCAAGTGGGGTCAAAAACACAAGT
TAAAATTTTAAAACTGAAAGATTCTAAAACCAATAACTCATATCAATTTTGCCCCCAACCATTAATTAACTTAAACTATTAATAAT
TAAAAATCCAATTATTAATTCTTAATTAATAAGCTTCATCCACTTGATCAGGACCAGACCATCTCAAATTCTCAATCTTCCTAACC
ACTTCAGCCATCTCAGGCCTCTGGTCCGGATGCTGTAACGTACACTCAATCCCTAGCTGCACCATCTCCTCCATCATTTCTTCTTC
CTCCCTTTCCAAGCTAAGCAGCTCCGAGTCAAAAACCTCTCTCCTCCACTCATCTCTCACCACCGACTTAACCCATCTCGGCAGAT
CAACTCCTTCCTCGTTCATCACCGAGTTGGAAGGAGCTTTACCAGTAATCAGCTCAAGAATCACCACACCGAAGCTGTACACGTCA
CCTTTCTGCGACACACGTTTAGGATCGGTTACTTCAGGCGCACGGTAACCCGTACCACGGTTTGGAGTCGTAGTTGAGGCTGATAC
GAGCTGGGACAAACCAAAGTCCGAGACTTTGGCGTCGTATGACTTGGTTAAGAGGATGTTTGAGGATTTGACATTGCCGTGAGAGG
TGGAGGTTCCTTGTGAGTGAAGGTAGTCTAAGCCACGAGCTGCACCAAGAGCAATTCGTGAACGTGCATCCCAAGTTAGTGGAGTC
CTTCCCGCTCCTCTGTTTCCATGTAAGAGAGCAGACAAGCTTCCCGTGTGCATGAAGTCATAGACAAGAAGCTTCTCGTCTCTACT
AAGATAGTAAGCCCTCAACGGCACCAAGTTCTCATGATCCATGGCACCAACCAACTCAATCTTCTCCCTGAAGTCTTTATCCGGCA
TCACCACATCCTTCAGCCTCTTTACCGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564528 receptor-like kinase 1 [Arabidopsis thaliana] | 1161 | 6e-125 |
| BAH20271 AT1G48480 [Arabidopsis thaliana] | 1161 | 6e-125 |
| XP_002891438 hypothetical protein ARALYDRAFT_891670 [Arabidopsis lyrata subsp. lyrata] | 1159 | 1e-124 |
| AAC95351 receptor-like protein kinase [Arabidopsis thaliana] | 1156 | 2e-124 |
| NP_566589 putative inactive receptor kinase RLK902 [Arabidopsis thaliana] | 1019 | 2e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LP77 Probable inactive receptor kinase At1g48480 | 1161 | 3e-126 |
| Q9LVI6 Probable inactive receptor kinase RLK902 | 1019 | 8e-110 |
| Q9M8T0 Probable inactive receptor kinase At3g02880 | 789 | 4e-083 |
| Q9FMD7 Probable inactive receptor kinase At5g16590 | 782 | 2e-082 |
| O48788 Probable inactive receptor kinase At2g26730 | 714 | 2e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5X571 At1g48480 | 1161 | 4e-125 |
| C0LGN3 Leucine-rich repeat receptor-like protein kinase (Fragment) | 1019 | 1e-108 |
| B9I2C3 Predicted protein (Fragment) | 921 | 3e-097 |
| C6TDG6 Putative uncharacterized protein | 920 | 4e-097 |
| B9T5A8 ATP binding protein, putative | 911 | 4e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G48480.1 RKL1; ATP binding / kinase/ protein serine/threonine kinase | 1161 | 2e-127 |
| AT3G17840.1 RLK902; ATP binding / kinase/ protein serine/threonine kinase | 1019 | 7e-111 |
| AT3G02880.1 leucine-rich repeat transmembrane protein kinase, putative | 789 | 3e-084 |
| AT5G16590.1 LRR1; ATP binding / kinase/ protein serine/threonine kinase | 782 | 2e-083 |
| AT2G26730.1 leucine-rich repeat transmembrane protein kinase, putative | 714 | 2e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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