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Information for unigene UN19519

FASTA Sequence
Unigene ID: UN19519Length: 2157  SNP
GGAATCAAAGAATAGTATTTCAACACAAAGTCGTCAATCTTAGTATCAACATCACTTCTAAAGAAAACCAAATAAAAAACAATTCA
AAACGTATTATAACCTTATATAGTAGTGGTTTTAATTAGAGCAAGGCAATTTCCTCAAATCTTTACAGTTAAAAAATAATGACAAA
AAAAAAACCTCCAAATTCTCTCTCCCCTCTGGTTTAAAGAGAAGGTCCACTATAACCTTGACCGGTTCTCTTAATCTTCCCCATCT
CCATTTCACGTGTGGTTTGGCCCTCGCTGCTTGAACCAGACGGGTAAAGTCCATAGTCACTTGTTGGATTACTGTACTCACCTGTG
GCGTTGTACTCTTGAGTTCCAAGTGCCATTTTCCTAAACTTCTTCATGTCTTCATTGTATTGGCTCGAGTCGTAATCAGTGCTTCC
TCCATATGAGCTGTATACATTGCTTTGACCTGGTCTCATCCCTTCGTTGAGATCTGACAGCGATACGTTTCCTTCTAACGCACGCA
CAATCTGGCTCATGCGAGGTCTGCGGCGAGCTGAATGGCGAACACAAGCCGCAGCACAAGCGACCATGCGAGCCATCTCCTCTCTG
TCATACTCGTTATTCATCTTTGCATCAGCTAAACCCTCAAAGTCTCCTTGTTCAGATGCTCGGTTAAGCAATGGACGTGCCCAGTC
AACTAAGCTGTCATCTACATAGACATTGTTGGCATCAACGGGTCGACGTCCGGTAATGAGCTCCAAAAGCACAACGCCAAATGAGA
AAACATCAGACTTCTCCGTGAGCTTTCCGCTTGCAGCGTACTCAGGAGCCAAATACCCAAAGGTTCCCATCACACGTGTAGATACA
TGAGTGTTTGTATCAGAAGCAATCTTAGCAAGACCAAAATCAGCAACCTTAGCCTCAAACTTGAAATCTATCAATATGTTAGCAGC
CTTGATATCACGGTGAATGATTTTAGGATTGCAATCTTCATGAAGATAAGAAAGTCCTTTAGCAGATCCAAGAGCAATCTTCAATC
TGGTCCTCCATTCCATTGTAGGCCGTCCCTCACCATGGAGGTGAAACTCGAGATTGTTGTTAGGAACAAACTCATAGACAAGCAAT
CTTTTAGCACCAGCGATGCAATAACCAACAAGAGAAACCAAATGCCTGTGGTGAACTCTGCTGATGATCTCAACCTCCGCCTGGAA
CTCTCTCTCTCCCTGACCACTCCCTACTTTCAACTGCTTCACGGCGACTTCTTTCCCACTAGGCAACACACCTTTGTGCACGTAAC
CGAACCCTCCTTGTCCCAACAGATTAGCCTCAGAGAAGCCGTTCGTGGCCCTTGCTAGCTCCTCGTATGTGAAAGTGCTTTTGGAG
AAGCCTAACACGAGCCCTGGAGACGGTGGAGGAAGAACTGGACGGTCCGAGTAGTCGGAGCCGCCGCTGCTGCTCATGAAAGGAGG
TGGTGGAGGTGGAGGAGGTTGCCGTGGTGGAGATGGAGCCTTAGGTGGTGGTAGTGGTGGTAGTGACGTCACGACATGATCTGACG
GTGGTAACGCGTTTTGTTGGCGCCATTGTTGCTGTTGTCCACCGTAAGGTCCTCCAGCTTTGGGACCAGGAGGAGGTGGTGGAGGA
ACATAGTAAGCATCTTCTTCATCTCTTCTTCGTTTCTTCTTACAAAGGAGACAAATCAGAGTCACTATCACAAGCAGAGCCACTCC
TCCTATGGCGATTCCGACCACCACTCCTGTTGATAAACCGTCGGAAGAAGAAGAAGAGGGCGGAGACGGCGAAGATGGAGTTCGAG
GAGATGATCCTCCTCCGCCGCCGCCGCCACCGCCACTTGAGGGATTGGACGGTGGTCCTGGGGATGATGGAGGGTTTCGAGAAGGG
GATCCAGGAGGAGTGATAGGTGCGGGGGGAGATCCCGGCGTAGTTGGAGCGGGTGGAGACGGCTGAGGAAGAGGAGGTGAAGATCC
CGGCGTAGATGGAGTGGGTGGAGATGGAGGAGGAGCAGAAGGTATAGAGGGAGAAGACGGAGGAGGAGATGTGGGAAGAGTGGCTG
GCGGCGGAGGAGAAGAGGGTGTGGTGGGAGGAGGAGCGGAAGCTGGAGGAGGAGTGGTGGTTGTGGAGTTTGATGGTGGAGATGGT
GGCGAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK21965 receptor protein kinase PERK1 [Brassica napus]29290.0
XP_002883531 hypothetical protein ARALYDRAFT_479967 [Arabidopsis lyrata subsp. lyrata]28820.0
NP_189098 proline extensin-like receptor kinase 1 [Arabidopsis thaliana]28810.0
AAK43886 protein kinase-like protein [Arabidopsis thaliana]28790.0
BAH57220 AT3G24550 [Arabidopsis thaliana]27436e-308

Swiss-Prot top hits (Blast detail)Scoree value
Q3EDL4 Probable serine/threonine-protein kinase At1g015407361e-076
Q9SJG2 Probable receptor-like protein kinase At2g429607217e-075
C0LGH3 Probable LRR receptor-like serine/threonine-protein kinase At1g561407111e-073
C0LGU5 Probable LRR receptor-like serine/threonine-protein kinase At5g457806876e-071
C0LGH2 Probable LRR receptor-like serine/threonine-protein kinase At1g561306851e-070

TrEMBL top hits (Blast detail)Scoree value
Q9ARH1 Receptor protein kinase PERK129290.0
Q9LV48 AT3g24550/MOB24_828810.0
Q94JZ6 At3g2460028790.0
C0Z3E1 AT3G24550 protein27434e-308
B9RKQ3 ATP binding protein, putative23814e-266

Arabidopsis top hits (Blast detail)Scoree value
AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase28820.0
AT2G18470.1 protein kinase family protein17073e-190
AT4G34440.1 protein kinase family protein16463e-183
AT1G49270.1 protein kinase family protein15882e-176
AT3G18810.1 protein kinase family protein15551e-172

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  15%
 
102  15%
 
213  23%
 
66  46%

Unigene MembersMember information