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Information for unigene UN19522
| FASTA Sequence |
| Unigene ID: UN19522 | Length: 1143 |
| SNP | AAATTTAATTCATTTTGACTTCAACTAAATTTAATATGTTCAAGTTCAACTAAACATTTCAAAAGAAAACAAAATTAAATTACTGG
CGAATCTTTGGAAACCAAACTAAAACCATTGCCTAAATTGTGTCTCTTGCTCATCATCTCTTCGTACTTCCCGGCCAGTGAGTCAA
AGAGAATCCCAGCACCAACTCCGACCGCAAGATCGATAGTGTAATGTCCTCTCGTCCCGAGCAGCCTGATGGATTGTAACACATTG
AGGATATCAAAAAGCATCGCTAGTCTCGACCTTTGCATTCTCCTCATATCCAAGGATGCTATCATCGAACCAGCGACGTGGCCCGA
GTAGAAGAGGAAGAATGAGACGTTTCCCACTGGAAAATCGACTCCTGATCCTAAAAACTCCTGAGGGAGAGGGAGCTGAGTAGAGT
AACCAAGAATGCCGCGACAAGTAAACATGAAGCACGCCGAGATGGTGGCTCGTGGTCTTCCTTCCATCAACCATGTCCATACAATA
TAGGTCGTTTGCATCGCTACGAATACCGTGTTTAGTGCGGCTAAAACGGTGTTAAGATCCGGTGAATTTGCCAAGACGCGGTTCAG
TGAGCGCGTGGCCACAAACCCAATATCGAACGGCTCAGACCTTGCGGGAATCATCTGAAGCGTATACTCCACGCCCATGAAGAACA
GAACTCCGACCGCGAACAAACACGGTATCCAATGGACTCTCGCCACGTAGATAACATCACGCGCCGTCCATGTCATAAAAGACGCC
TTGCTTTTCCCTCCTCCTCCTCCGCTGGCGTAGCCGTCGTCTGTTTTCTTAACAGTGCTCTCCATTGATGGGACGGTTCCGTCAAA
TGCGACGCCGTTACTGTGGTGTCCGTTAAGAGAGTTAGATCTGCGACGGAGAGGGACGCCAGTTTCAGTTGACATAAGCGTCAGGT
ATGGGTTATGTAAGAGGCAGAGATTTCGAAGGAGGTATTGTTCTATATTTTGTGAACTGTGGAAGGAAGATTGTTTGGTCTACAAA
AAATCATACGAAAACGATGAGTATGAGGTTCGAGAGCTGCGTTTACGCAAGTCTTTGCCTTGTTATTATTTTTTTCTCTACTCTCT
TTGTTGGGCTTTACTTTTTGTACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882965 hypothetical protein ARALYDRAFT_897881 [Arabidopsis lyrata subsp. lyrata] | 1169 | 8e-126 |
| NP_566527 phosphatidic acid phosphatase-related protein [Arabidopsis thaliana] | 1142 | 1e-122 |
| AAK49592 AT3g15820/MSJ11_22 [Arabidopsis thaliana] | 1142 | 1e-122 |
| NP_188204 phosphatidic acid phosphatase-related protein [Arabidopsis thaliana] | 1005 | 9e-107 |
| XP_002882966 hypothetical protein ARALYDRAFT_341711 [Arabidopsis lyrata subsp. lyrata] | 999 | 4e-106 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94JW1 AT3g15820/MSJ11_22 | 1142 | 8e-123 |
| Q9LVZ7 Genomic DNA, chromosome 3, P1 clone: MSJ11 | 1142 | 8e-123 |
| Q9LVZ6 Genomic DNA, chromosome 3, P1 clone: MSJ11 | 1005 | 6e-107 |
| B9RV74 Putative uncharacterized protein | 885 | 5e-093 |
| B9GFB0 Predicted protein | 870 | 3e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15820.1 phosphatidic acid phosphatase-related / PAP2-related | 1142 | 4e-125 |
| AT3G15830.1 phosphatidic acid phosphatase-related / PAP2-related | 1067 | 2e-116 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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