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Information for unigene UN19523

FASTA Sequence
Unigene ID: UN19523Length: 1308 SSR 
TTTTTTCCCTCTCTGCAGTAGCATCCATAGGGGGAAAGAGAGAGAGAGAGAAAGCTCTATAATGGCAGAATGAACAAAGCACTTTC
ACAGACTCTTATCCTCCCAAGAGGAAGATAAATAAGATGGCTTTAGAAGAAGAGGAAGAGGTTCAAAACGCACCGTTTTGTATGCT
TTTCTGCGAGGAAGAGAGCCATGAGTTAGAGGGAGACGTGAGCGTCGTAAAGTTTCCGTTTTTACATCTGGATTTTCTCGATCATG
ACATGTTGTGGGATGACGACGAGTTACTAGGTTTGATTTCGAAAGAAAACGAGCTAAGGCCGTGTCTTTCCGACAGTGTGTTAGAT
GAGTTTCTTGTCCTGTGCCGCGAGAAGGCTCTTGATTGGATCTTTAGAGTGAAAACTTATTATGGGTTTAATGCGTTGACGGCTCT
TCTTGCTGTTAACTACTTCGATAGGTTTCTTACCACCAGGAAGTTTCAGACAGATAAGCCGTGGATGTCTCAGCTTACAGCTGTGG
CTTGTCTGTCTTTAGCTGCTAAAGTTGAAGAGATCCGTGTTCCGTTGCTCTTAGATCTTCAGGTGGGAGAGCCAAGATATGTCTTT
GAGGCTAAAACCATACAGAGAATGGAGCTTTTGATTCTCTCTACTCTTGAATGGAGGATGCATCCCGTGACTCCAATCTCGTTTTT
CGATCACATTATGCGTCGGTACAGCTCTAAGTCTCACCAGGACTTGGAGTTCTTGAGTAGGTGCGAATCTCTGCTGCTCTCCGTTG
TTACTGATTCGAGGTTTCTAAGTTACAGTCCTTCTGTGTTGGCCACTGCAATAATGGTCTCTGTTGTTAGAGATTTCAAGACGTGT
GACGAAGCTGAATACGAATCTCAGCTCATGACTCTACTCAAAGTTGATCCGGAGAAAGTAAATAAGTGCCATGAGTTAGTGTTTGA
TCACATCCCAAGCAAGAAAAGGATGATGCAACCCTCTAGTCCAACCGGTGTATTTGATGCATCGTTCAGCTCTGATAGCTCAAACG
AATCATGGGTTGCGTCTGCTTCTGCTTCAGCTTCAGTGTCTGCATCACAGTCTCCAGAGCCTCTATTCAAGAGGAGAAGAGTTCAG
GAGCAGCAGATGAAGCTGTCTTCAATAAACAGAATGTTTCTCGATGTGTTCACAAGTAGTCCTCGCTAATAATTTTTAGAAGCATA
TAAGATATGTTTTCCCCTGCTTACTCTCGGCTCTTGTGTCTATGGACGGTTTCAAATGGTGTACTCTTCAGTATTTGATAATTTGA
AAGATCTTTTACTTGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877727 CYCD3_3 [Arabidopsis lyrata subsp. lyrata]14289e-156
NP_190576 cyclin-D3-3 [Arabidopsis thaliana]14119e-154
XP_002866711 CYCD3_2 [Arabidopsis lyrata subsp. lyrata]11133e-119
NP_201527 cyclin-D3-2 [Arabidopsis thaliana]11107e-119
XP_002283380 PREDICTED: hypothetical protein [Vitis vinifera]9565e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q9SN11 Cyclin-D3-314114e-155
Q9FGQ7 Cyclin-D3-211103e-120
P42753 Cyclin-D3-17116e-074
Q8LHA8 Cyclin-D2-24482e-043
Q6YXH8 Cyclin-D4-14454e-043

TrEMBL top hits (Blast detail)Scoree value
A5BCN9 Putative uncharacterized protein9521e-100
Q7XAB7 Cyclin D3-29026e-095
Q6QH76 Cyclin D3-29001e-094
Q84V88 Cyclin D8793e-092
A9PAI5 Putative uncharacterized protein8784e-092

Arabidopsis top hits (Blast detail)Scoree value
AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase14123e-156
AT5G67260.1 CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinase11131e-121
AT4G34160.1 CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein binding7115e-075
AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator3971e-038
AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding3925e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
92  40%
 
101  20%

Unigene MembersMember information