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Information for unigene UN19527
| FASTA Sequence |
| Unigene ID: UN19527 | Length: 1012 |
| SNP | GGTACTATGAAAATGGTATTTTTGGCAATTTCTCATTCAACAAAGTATTTATTTATAACATCACCACACAAAGGCCAAGGTAGGCC
AAGGTCCATTGACAAAAAGCAAAGGCCCATTAACATATAACACAGAGTTTAAAATTGGTAATAGAAAGAATGGATGGTAGATAATG
GAGCCATTGCCTGCTCTCATGGTTCAAAGTTGGAGTCACTCATCATCAATCAAGCTGCCCCAACCTGGCCAAAGAGCGCCTTTCGA
ATCTCAGGGAGTTTCTTGCGGAAAGCGACCTCCAACCTCGCATCAAGAGTGTTTTCACACACAATTTTCCCATCACGAGAAGCCAG
CACCACTCCTCCAGCACAGAAAGGAGCATGAGGATCATCTTCGGAAGGAGCAGGAGGAAGGAAAATGTCCTTGTCAACTATAATCT
CAGGAGCATGAACCTTTGCTTTCTCGCAGTATTCTTCAGTTGCATCGTCAAGCATCGACTCCACTATGTGAAGGTCTTCTTGGCGA
CAACGCAGTAACACTGAAGGCTCTTTCAGTCTAAGCAAACACTGAACAATGAGATGCTTCAAGAGATGTTTGTACTGATGGTGATG
ATGGTTGAAGAAGCCATGTTCGCTGACTTTGAGGAGTTGCTTTGCAGCCTCTTCTTTCATTGCATTGACAATGTCATCTTGAGCTT
GCAGAACTTTGATCCTCGATGCGTTCAATTGCATTGAGTAATCAATCTTCCTTCGGACATCGACCTGCTTCTCCTTCTTCTCATAC
TCCTGTCTAATCTTCTTCTTCTCTGCCTCGACCAGCTGCAACTTCTCAATGTTGAATTCTTCTTCAGCGGAGACGGAGATCTCATT
GGCCTTTTCTTCGGCTTCCTGGCGGATAAACCTCACCATCTGCTGGATCTGTCTGGACACATCTGCGTCGTTCATCTTTAGCCACC
TAACAAATGACGATTGGGAGAAGGAAACAAAAAACAGAGGAGTTCTTGTAGTAGTGATTGATGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176602 V-type proton ATPase subunit E3 [Arabidopsis thaliana] | 1120 | 3e-120 |
| XP_002886357 F22C12.4 [Arabidopsis lyrata subsp. lyrata] | 1113 | 2e-119 |
| AAF24559 F22C12.4 [Arabidopsis thaliana] | 1070 | 2e-114 |
| NP_192853 V-type proton ATPase subunit E1 [Arabidopsis thaliana] | 932 | 2e-098 |
| XP_002872553 hypothetical protein ARALYDRAFT_489953 [Arabidopsis lyrata subsp. lyrata] | 931 | 3e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0CAN7 V-type proton ATPase subunit E3 | 1120 | 1e-121 |
| Q39258 V-type proton ATPase subunit E1 | 932 | 9e-100 |
| O23948 V-type proton ATPase subunit E | 893 | 3e-095 |
| Q9SWE7 V-type proton ATPase subunit E | 872 | 8e-093 |
| Q9MB46 V-type proton ATPase subunit E | 871 | 1e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RCM6 Vacuolar ATP synthase subunit E, putative | 933 | 1e-098 |
| A2WTF3 Putative uncharacterized protein | 929 | 3e-098 |
| Q8SA35 Os01g0659200 protein | 929 | 3e-098 |
| A9PI22 Putative uncharacterized protein | 915 | 1e-096 |
| B9N7W9 Predicted protein | 913 | 2e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64200.1 VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3); proton-transporting ATPase, rotational mechanism | 1121 | 1e-122 |
| AT4G11150.1 TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1); proton-transporting ATPase, rotational mechanism | 932 | 8e-101 |
| AT3G08560.1 VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2); hydrogen-exporting ATPase, phosphorylative mechanism / proton-transporting ATPase, rotational mechanism | 795 | 6e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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