 |
Information for unigene UN19532
| FASTA Sequence |
| Unigene ID: UN19532 | Length: 966 |
| SNP | GGATCTCTTTACAGACCATGTTTCTGTAAACCAGAGAGGATCTCACAACATAAACTCTCTCTTTCACATTTTTCAGACAAGAAAAA
AATGGCTGCAGCATTCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTTGCTCAAATCCGACCATTTAGGA
CATCACAAAAGGCTTTCGTGGTGACGAACCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAGAAGAGCAA
CCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGACCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAG
AGAGTTTGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTGCTTATATAGATCCTGAGACTTGTGAGTTTG
ACCAGACGCAGTTGGATAAACTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAGCTGTAACAAGGTTTAT
TCTTATTTCCAAGAACTTGTCGATCACTATGAGGGAGCACCATTGACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGAGCA
TTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGGATGCAAGAGTTCTTAATTTCAGTATGGGAAAGCCTCGTG
TTCAGTTCAACACCAGCAACATTGAAGGTGGTGGAGATGACCAGCCTCAAGAAGATGCATAATGAAAACAGCTCTATACCAAAGTT
GTGGACAAACGAGATCAAAAATATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTTTTTTCCATTCTCTCGTCTTAT
AAGTAGAATATAAAGCATGTCCATGATTTTGCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTTAATAAACG
TTTCAACGCCTAAAAAAAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001031804 NAD(P)H-quinone oxidoreductase subunit M [Arabidopsis thaliana] | 987 | 8e-105 |
| BAE99184 hypothetical protein [Arabidopsis thaliana] | 922 | 3e-097 |
| XP_002866923 hypothetical protein ARALYDRAFT_327981 [Arabidopsis lyrata subsp. lyrata] | 916 | 1e-096 |
| XP_002285884 PREDICTED: similar to NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Vitis vinifera] | 686 | 7e-070 |
| ACU16247 unknown [Glycine max] | 662 | 4e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2V2S7 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | 987 | 4e-106 |
| A7NVJ4 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | 686 | 3e-071 |
| A9PJQ8 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | 652 | 3e-067 |
| A2XVZ1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | 565 | 3e-057 |
| Q7FB12 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic | 565 | 3e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T3K9 Putative uncharacterized protein | 662 | 3e-067 |
| B9S2T3 Putative uncharacterized protein | 660 | 5e-067 |
| C9EIN8 Putative NADH dehydrogenase | 638 | 2e-064 |
| B9H7J7 Predicted protein | 584 | 3e-058 |
| B7EXV4 cDNA clone:001-118-H01, full insert sequence | 565 | 5e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37925.1 NDH-M (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex) | 997 | 2e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
