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Information for unigene UN19541
| FASTA Sequence |
| Unigene ID: UN19541 | Length: 1130 |
| SNP | GTGGTTTGCTGCCGATGCTGACACCATCTCTGCAAAGTGTTGGGACCAGGAGGAGTTGCTTCCTGGTGGACATGGTCTCATGGTTA
GAGGGTATCGTCCTGTCATCAATACCTTAGCCAAAGGGATTGATATTCGTCTAGGCCATAGGGTTACTAAGATCGTAAGGCGGTAT
AATGGAGTCAGGGTAACAACAGAAAATGGACAAACATTTGTTGCGGACGCTGCAGTGATCGCTGTCCCTCTCGGTGTCTTAAAATC
CGGAACCATAACATTCGAACCGAAGCTACCAGAGTGGAAACAAGAAGCAATCAACGACCTCGGAGTAGGAATAGAAAACAAGATCA
TACTCCATTTCGAAAAAGTCTTCTGGCCAAAAGTAGAGTTTCTAGGAGTAGTCGCCGAAACCTCTTACGGCTGCAGCTATTTCTTG
AACCTCCACAAGGCCACAGGACATCCAGTTCTGGTCTACATGCCGGCCGGTCAGCTCGCCAAAGACATCGAGAAGATGTCTGATGA
AGCAGCTGCGAATTTCGCCGTCTTGCAGCTCCAGAGGATTCTTCCTGACGCTCTGCCTCCGGTGCAGTATCTAGTATCGAGGTGGG
GGTCTGATGTGAACTCGTTGGGATCTTATAGCTATGATATCGTGGGGAAACCTCATGATCTCTACGAGAGGCTTAGGGTTCCGGTG
GATAACTTATTCTTTGCCGGTGAAGCGACGAGCTCTAGCTTCCCTGGCTCGGTGCACGGGGCGTATTCGACTGGTTTGATGGCGGG
TGAGGATTGTAGGATGCGTGTGTTGGAGAGGTATGGTGAGTTGGATCTGTTTCAGCCTGTGATGGGTGAAGAAGGACCTGCCTCTG
TTCCTCTTCTTATATCTCGTCTCTAAAACTCATCCACCATTATCAAACTAGTCTTTGCAATCTGTTGTGCTATATATATTTCTATC
AAGCTGTCGGCTACTAGAAAGAACCTAAAGTGGTTTGTCTCTGTCTTGTTGGGAAAACTATTAAGTATTACTATTCTCTAGTGTTG
GATCGTATTAAAACTCTGGTCAGTGTTTTGTTCAATAATGTGAACATTAATTATATCCTTGTGATATGTTTATATATGACAATCAT
CTTTGAGGACAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181830 putative polyamine oxidase 2 [Arabidopsis thaliana] | 1511 | 2e-165 |
| XP_002880017 ATPAO2 [Arabidopsis lyrata subsp. lyrata] | 1508 | 4e-165 |
| AAL75899 At2g43020/MFL8.12 [Arabidopsis thaliana] | 1504 | 1e-164 |
| XP_002521588 amine oxidase, putative [Ricinus communis] | 1386 | 6e-151 |
| XP_002306765 predicted protein [Populus trichocarpa] | 1351 | 7e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKX5 Probable polyamine oxidase 2 | 1511 | 8e-167 |
| Q9LYT1 Polyamine oxidase 3 | 1315 | 4e-144 |
| Q8H191 Probable polyamine oxidase 4 | 945 | 3e-101 |
| Q9LID0 Lysine-specific histone demethylase 1 homolog 2 | 363 | 1e-033 |
| Q8VXV7 Lysine-specific histone demethylase 1 homolog 1 | 348 | 6e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S6G9 Amine oxidase, putative | 1386 | 4e-151 |
| B9H864 Predicted protein | 1351 | 4e-147 |
| B9GSQ8 Predicted protein | 1324 | 6e-144 |
| Q1EPI3 Amine oxidase family protein | 1168 | 7e-126 |
| Q01KC7 H0215F08.3 protein | 1164 | 2e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43020.1 ATPAO2 (Polyamine oxidase 2); amine oxidase/ electron carrier/ oxidoreductase | 1512 | 5e-168 |
| AT3G59050.1 ATPAO3 (Polyamine oxidase 3); polyamine oxidase | 1327 | 2e-146 |
| AT1G65840.1 ATPAO4 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 4); amine oxidase/ polyamine oxidase | 946 | 2e-102 |
| AT4G16310.1 LDL3 (LSD1-LIKE3); amine oxidase/ electron carrier/ oxidoreductase | 412 | 2e-040 |
| AT3G13682.1 LDL2 (LSD1-LIKE2); amine oxidase/ electron carrier/ oxidoreductase | 363 | 9e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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