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Information for unigene UN19542
| FASTA Sequence |
| Unigene ID: UN19542 | Length: 908 |
| SNP | GGGAAGAAGACCGAAATCGAATTTGGGGAGATTCGTCAATGGCTTCGATGCTTGCTCGCAGGTCTCTGGATACTCTCCGTGCTCGA
CATCTCGTTTTGTCAGGGAAAGCTTTGCAGGGAACTCATCTTTCTCCACTGCAGTCCCGTGGTATTTCTTATGGCTCCAAGAAAGA
TGATGAAGAAGAGGAGCAACTTGCTAAGGAAATCTCCAAGGACTGGAATACTGTCTTTGAACGGAGCATAAACACGCTGTTTCTCA
CTGAAATGGTCCGTGGTTTGTCGTTGACCCTCAAGTACTTCTTTGATCCCAAAGTTACCATCAATTATCCATTTGAGAAGGGTCCA
CTGAGCCCTCGCTTCCGTGGTGAACATGCTCTTCGACGGTATCCTACTGGGGAGGAACGCTGCATTGCCTGCAAACTCTGTGAAGC
TGTGTGTCCAGCTCAAGCAATCACAATAGAAGCAGAAGAGCGAGAAGATGGAAGCCGCAGAACCACAAGGTATGACATCGACATGA
CGAAATGCATTTACTGTGGTTTCTGCCAAGAAGCTTGCCCCGTTGATGCAATCGTCGAAGGACCTAACTTCGAATTCGCAACTGAG
ACACACGAGGAGCTTCTGTATGACAAAGAAAAGCTGCTAGAGAATGGAGATCGATGGGAGACGGAGATCGCTGAGAATCTGAAATC
AGAGAGTCTCTACCGTTGAGAGCACTCTTTTTTTTTGCTTCATTGTTTAGAAATAAAAAGACGAGTGCTTTATGCGTTTGCAGAAA
AAACTCCTCTGTTGTACACCAGCTTTGTGGCTGTGTAATTGAATTGTCTATTGTAAACCAGTTCGGTTCCGGTTCACGAATTCCGG
TTTAATTGAATTATCGCATTCAGACATGAAATCAATATTTTAATGCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178022 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8 [Arabidopsis thaliana] | 1125 | 7e-121 |
| NP_173114 Alpha-helical ferredoxin [Arabidopsis thaliana] | 1088 | 1e-116 |
| XP_002509486 NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] | 999 | 3e-106 |
| XP_002313797 predicted protein [Populus trichocarpa] | 996 | 7e-106 |
| ABA81853 NADH:ubiquinone oxidoreductase-like [Solanum tuberosum] | 990 | 3e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42599 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 1125 | 3e-122 |
| P80269 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 984 | 7e-106 |
| O24143 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 907 | 6e-097 |
| O21233 NADH-ubiquinone oxidoreductase subunit 8 | 755 | 3e-079 |
| P42028 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | 726 | 6e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWI2 Putative uncharacterized protein At1g79010 | 1125 | 5e-121 |
| Q9FX83 NADH:ubiquinone oxidoreductase, putative | 1088 | 1e-116 |
| B9RBF2 NADH-ubiquinone oxidoreductase 1, chain, putative | 999 | 2e-106 |
| B9HRN3 Predicted protein | 996 | 5e-106 |
| Q38M79 NADH:ubiquinone oxidoreductase-like | 990 | 2e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G79010.1 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) | 1126 | 2e-123 |
| AT1G16700.1 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative | 1089 | 4e-119 |
| ATCG01090.1 Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex | 186 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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