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Information for unigene UN19547

FASTA Sequence
Unigene ID: UN19547Length: 1035  SNP
GAGATACTGGTTTAAATTCAACAAGCGCCGTAGGTTCTATATCTTTGCTTCTGCTTCGTCGTCGACCCCAACTTATACTCAGCAGC
CATGGCCGTCGGGAAGAACAAGCGAATCTCCAAAGGAAGAAAGGGAGGGAAGAAGAAGATTGTTGATCCTTTCTCCAAGAAGGATT
GGTATGACATCAAGGCTCCCTCTAACTTCACCCATAGAAATGTCGGGAAGACACTTGTTTCCAGAACTCAGGGTACCAAGATTGCT
TCAGAGGGTTTGAAACACAGAGTTTTCGAGGTGTCTCTTGCTGATCTTCAAAATGATGAGGATAACGCTTACAGGAAGATCCGTCT
CAGAGCTGAAGATGTTCAGGGAAGGAATGTCTTGACTCAGTTCTGGGGCATGGACTTCACCACTGATAAACTCAGATCCTTGGTGA
AAAAGTGGCAGACTTTGATTGAGTCTCATGTTGATGTTAAGACCACCGACAACTACACATTGAGGCTTTTCTGCATTGCTTTCACC
AAGAGACGTGCTAACCAAGTCAAGAGAACTTGCTATGCTCAGTCAAGCCAAATCCGTCAGATTCGCAGCAAGATGAGGGAGATTAT
GATCAAGGAAGCTTCCTCTTCTGACCTCAAGGAGCTTGTTGCCAAGTTTATTCCAGAATCTATTGGTAAGGAGATTGAGAAGGCAA
CTCAGGGCATCTACCCTCTTCAGAATGTTTTCATCCGTAAAGTCAAGATCCTCAAGGCTCCTAAATTCGACCTCGGAAAGCTCATG
GAGGTTCACGGAGACTACACAGCAGAGGATGTTGGTGTGAAGGTTGACAGGCCGGCCGATGAGACTGTGGTCGAAGAACCTACTGA
GATCATTGGAGCTTAAGAGATTCGTTTTTATTCCAAACTTTTAGTATCTTTAATGCTCTGTGTCGTTTCAGACTCGTTTGGTCCTT
GAGCTTTTCTTTTTGATGTATTTGTGTACTTTTTCTCAGTATAAAATTTGCCAGTTTTGGATATTATTTATCCAACGCTTGTTCAT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195193 40S ribosomal protein S3a-2 [Arabidopsis thaliana]12782e-138
XP_002882377 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]12692e-137
XP_002869131 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]12682e-137
NP_187135 40S ribosomal protein S3a-1 [Arabidopsis thaliana]12593e-136
XP_002512232 40S ribosomal protein S3a, putative [Ricinus communis]11742e-126

Swiss-Prot top hits (Blast detail)Scoree value
Q42262 40S ribosomal protein S3a-212787e-140
P49396 40S ribosomal protein S3a12671e-138
Q9CAV0 40S ribosomal protein S3a-112591e-137
Q8GTE3 40S ribosomal protein S3a11471e-124
A5B4K1 40S ribosomal protein S3a-111391e-123

TrEMBL top hits (Blast detail)Scoree value
B9RER3 40S ribosomal protein S3a, putative11741e-126
C6TI64 Putative uncharacterized protein11678e-126
C6TLV6 Putative uncharacterized protein11605e-125
C6TIB6 Putative uncharacterized protein11571e-124
C6TLT3 Putative uncharacterized protein11571e-124

Arabidopsis top hits (Blast detail)Scoree value
AT4G34670.1 40S ribosomal protein S3A (RPS3aB)12795e-141
AT3G04840.1 40S ribosomal protein S3A (RPS3aA)12608e-139

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  9%
 
92  18%
 
113  27%
 
103  27%
 
202  18%

Unigene MembersMember information