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Information for unigene UN19547
| FASTA Sequence |
| Unigene ID: UN19547 | Length: 1035 |
| SNP | GAGATACTGGTTTAAATTCAACAAGCGCCGTAGGTTCTATATCTTTGCTTCTGCTTCGTCGTCGACCCCAACTTATACTCAGCAGC
CATGGCCGTCGGGAAGAACAAGCGAATCTCCAAAGGAAGAAAGGGAGGGAAGAAGAAGATTGTTGATCCTTTCTCCAAGAAGGATT
GGTATGACATCAAGGCTCCCTCTAACTTCACCCATAGAAATGTCGGGAAGACACTTGTTTCCAGAACTCAGGGTACCAAGATTGCT
TCAGAGGGTTTGAAACACAGAGTTTTCGAGGTGTCTCTTGCTGATCTTCAAAATGATGAGGATAACGCTTACAGGAAGATCCGTCT
CAGAGCTGAAGATGTTCAGGGAAGGAATGTCTTGACTCAGTTCTGGGGCATGGACTTCACCACTGATAAACTCAGATCCTTGGTGA
AAAAGTGGCAGACTTTGATTGAGTCTCATGTTGATGTTAAGACCACCGACAACTACACATTGAGGCTTTTCTGCATTGCTTTCACC
AAGAGACGTGCTAACCAAGTCAAGAGAACTTGCTATGCTCAGTCAAGCCAAATCCGTCAGATTCGCAGCAAGATGAGGGAGATTAT
GATCAAGGAAGCTTCCTCTTCTGACCTCAAGGAGCTTGTTGCCAAGTTTATTCCAGAATCTATTGGTAAGGAGATTGAGAAGGCAA
CTCAGGGCATCTACCCTCTTCAGAATGTTTTCATCCGTAAAGTCAAGATCCTCAAGGCTCCTAAATTCGACCTCGGAAAGCTCATG
GAGGTTCACGGAGACTACACAGCAGAGGATGTTGGTGTGAAGGTTGACAGGCCGGCCGATGAGACTGTGGTCGAAGAACCTACTGA
GATCATTGGAGCTTAAGAGATTCGTTTTTATTCCAAACTTTTAGTATCTTTAATGCTCTGTGTCGTTTCAGACTCGTTTGGTCCTT
GAGCTTTTCTTTTTGATGTATTTGTGTACTTTTTCTCAGTATAAAATTTGCCAGTTTTGGATATTATTTATCCAACGCTTGTTCAT
TCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_195193 40S ribosomal protein S3a-2 [Arabidopsis thaliana] | 1278 | 2e-138 |
| XP_002882377 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata] | 1269 | 2e-137 |
| XP_002869131 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata] | 1268 | 2e-137 |
| NP_187135 40S ribosomal protein S3a-1 [Arabidopsis thaliana] | 1259 | 3e-136 |
| XP_002512232 40S ribosomal protein S3a, putative [Ricinus communis] | 1174 | 2e-126 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42262 40S ribosomal protein S3a-2 | 1278 | 7e-140 |
| P49396 40S ribosomal protein S3a | 1267 | 1e-138 |
| Q9CAV0 40S ribosomal protein S3a-1 | 1259 | 1e-137 |
| Q8GTE3 40S ribosomal protein S3a | 1147 | 1e-124 |
| A5B4K1 40S ribosomal protein S3a-1 | 1139 | 1e-123 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RER3 40S ribosomal protein S3a, putative | 1174 | 1e-126 |
| C6TI64 Putative uncharacterized protein | 1167 | 8e-126 |
| C6TLV6 Putative uncharacterized protein | 1160 | 5e-125 |
| C6TIB6 Putative uncharacterized protein | 1157 | 1e-124 |
| C6TLT3 Putative uncharacterized protein | 1157 | 1e-124 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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