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Information for unigene UN19550
FASTA Sequence |
Unigene ID: UN19550 | Length: 775 |
| SNP | GGGTTGCAGATTGAAAGAAAAACAAATATCCATACAAACACAATACATATTTGAGAGACACAGAGGAAGAGAATAACCCATTCGTA
GTTTTCTTGCAAAAAAAAAAAAACAAGCCAAAAATCAGAACGAGAAGATGGGAGTTGGAGGAACATTAGAGTATATATCTGAGCTA
ATAGGAAGTGGAGGAAGTCATAGCTATGGCAAGAGGAAGAAGAAGAAGCAGTTTCAGACAGTGGAGCTCAAAGTGAGAATGGATTG
TGATGGTTGTGTCCTCAAAGTCAAGAACTCTCTTTCTTCTCTAAAAGGAGTTAAATCGGTGGAGATAAACAAGAAGCAGCAAAAGG
TGACGGTGAGTGGTTACGCGGAACCGAGCAAGGTGCTGAAGAAGGCCAAAGCGACGGGGAAGAAGGCTGAGATATGGCCTTACGTT
CCCTACAACTTGGTGGCTCAGCCCTACATAGCTCAGGCTTACGACAAGAAGGCGCCGCCTGGTTACGTCAGAAAAGTCGACCCATA
CGCCACCACGGGGACGATGGCTGTTTACAACGATGACCCTTCTTACACTTCTATGTTTAGTGATGATAATCCTAATGCTTGCTCCA
TTATGTAATTACTAAATCAATAATACAGACGGTTTATATGTATATGTATAAATATGAGTTATATAGATTTTGGTGTTTTTTGTTCA
GGATTTTGTCTTCTTTTGCATGTGCTTTCTGTTTGTGTTACAAGAATGTTAATTAATTTTAATAAATGCCTATTATATAGACTAAT
C
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GenBank top hits (Blast detail) | Score | e value |
NP_195680 heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana] | 784 | 2e-081 |
XP_002866879 predicted protein [Arabidopsis lyrata subsp. lyrata] | 776 | 2e-080 |
XP_002528981 metal ion binding protein, putative [Ricinus communis] | 608 | 5e-061 |
XP_002307111 predicted protein [Populus trichocarpa] | 603 | 2e-060 |
ACU15561 unknown [Glycine max] | 583 | 4e-058 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
O65657 Putative uncharacterized protein AT4g39700 | 784 | 1e-081 |
B9SSL2 Metal ion binding protein, putative | 608 | 3e-061 |
B9H568 Predicted protein | 603 | 1e-060 |
C6T1V0 Putative uncharacterized protein | 583 | 3e-058 |
B7FMT9 Putative uncharacterized protein | 567 | 2e-056 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G39700.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | 785 | 6e-084 |
AT4G08570.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | 438 | 1e-043 |
AT1G22990.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | 433 | 4e-043 |
AT1G71050.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | 433 | 4e-043 |
AT4G38580.1 ATFP6 (FARNESYLATED PROTEIN 6); metal ion binding | 396 | 8e-039 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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