 |
Information for unigene UN19557
| FASTA Sequence |
| Unigene ID: UN19557 | Length: 1143 |
| SNP | ATTTCGCAACCTATCCTATCGGAAAGGATATGACTAACGGAGACGGACGTTCAACCGCCGTTACCAACTCCGTAACGGAGAGGAGT
TCGCCTCCGTCGTCTGATCCTCCAATCCGTGTCTACGCAGATGGGATCTACGATCTGTTCCATTTCGGTCACGCTCGATCTCTCGA
ACAGGCTAAGAAATCGTTTCCAAACACTTACCTTCTTGTGGGATGCCGCAACGATGAGACTACTCACAAGTATAAGGGAAAGACGG
TGATGAATGATCAAGAACGATATGAATCTCTTCGACATTGCAAATGGGTGGATGAAGTTATCCCTGATGCACCGTGGGTGATCAAC
CAAGAGTTTCTTGACAAGCACCGTATTGCCTATGTGGCCCATGATGCTCTTCCGTATGCTGATGCCAGTGGAGCTGGAAAAGATGT
CTATGAATTCGTAAAGAAAGTCGGGAGGTTCAAGGAGACTAAGAGAACTGAAGGGATATCTACTTCGGATATAATAATGAGGATAG
TGAAAGATTATAACCAGTATGTCATGCGTAACCTTGACAGGGGATACTCAAGGGAGGATCTTGGAGTTAGCTTTGTCAAAGAAAAG
AGACTTCGAGTTAATATGAGGCTGAAGAAACTTCAGGAGAAGGTCAAAGAACAACAAGAAAAAGTTGGGGAAAAGATGCAAACTGT
GAAAATGGTACGTAATGAGTGGGTGGAGAATGCAGATCGTTGGGTAGCTGGATTCCTTGAAATGTTTGAAGAAGGCTGCCATAAGA
TGGGAACTGCCATCAGAGACCGAATCCAAGAGAAGTTAATGCGACAAGAGTCCAAAGAATTGCTCGAGAAGGATCAAATCGGTCAG
CATAAAGACACAGAGGAACAGTTCTATGAAGAATATTTCGAGCATGACATTGTTGACAGCTGTGAAGACGATGAAGAAGAGTACCA
TGACGAGATTCAAGAGCAATGTAGTGCCTCAAAAGCCATAAAAAGTAACTAGAGGAACACAAATTTATGTTGTTTTAGTGCCTATT
GTTCAATACTTTTGCAGTAAAATGCTTATCAAATGACTTATTAGTTAGCTATAAAAGTTTAGAAAATGTTTGTGTGCTTTATTTTC
TTATACACGCAATCTTTTTGCCCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAA09644 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1554 | 2e-170 |
| BAA09642 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1326 | 5e-144 |
| BAA09571 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1321 | 2e-143 |
| XP_002879376 CTP:phosphocholine cytidylyltransferase [Arabidopsis lyrata subsp. lyrata] | 1296 | 2e-140 |
| NP_180785 phosphorylcholine cytidylyltransferase [Arabidopsis thaliana] | 1292 | 5e-140 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y5K3 Choline-phosphate cytidylyltransferase B | 637 | 2e-065 |
| Q811Q9 Choline-phosphate cytidylyltransferase B | 633 | 5e-065 |
| Q9QZC4 Choline-phosphate cytidylyltransferase B | 633 | 5e-065 |
| P49585 Choline-phosphate cytidylyltransferase A | 623 | 7e-064 |
| P19836 Choline-phosphate cytidylyltransferase A | 619 | 2e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q42622 CTP:phosphocholine cytidylyltransferase | 1554 | 1e-170 |
| Q42621 CTP:phosphocholine cytidylyltransferase | 1531 | 6e-168 |
| Q42619 CTP:phosphocholine cytidylyltransferase | 1326 | 4e-144 |
| Q42620 CTP:phosphocholine cytidylyltransferase | 1321 | 1e-143 |
| Q9ZV56 CTP:phosphocholine cytidylyltransferase | 1292 | 3e-140 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G32260.1 cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative | 1292 | 2e-142 |
| AT4G15130.1 catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase | 1099 | 4e-120 |
| AT2G38670.1 PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase | 267 | 1e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
