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Information for unigene UN19558

FASTA Sequence
Unigene ID: UN19558Length: 863  SNP
GGAAGCCTGTTTCATTATTAATAACCTTCATATATAATCATTTAGGTTTATCTAAATAGCTAGTTGTATATATGGTTAATATCGAC
AACGATTAAAATGAACTCGATCGTTATTGTTTCATGATGTAGACAATAACAACTGGATCGTACTTTCACGTAGAACTTTCGGGATC
ATCAATAGGTAAATTCTTAGGGATGTTCCATTCATGAGCTTTCCACTCTGGCAATTGTTGTATGACGACCAATCCGGTTGAATCTG
GATTTCCCACGTTGGTTTGACAAGCTAGTCTCCAGTTTTTTGGTTTCCTTTTGAGTTTCTCCTTTTCAATGTCAGTTCGTGGGTTG
AGAAGCTCCTTTCCATTTACAATCTCGACCATGCAAGTAGCGCAGGTTCCTACTCCTGCGCAGTTTGACAAGGGCTTACTATAAGG
ACCATAGAGTTCGATGTTAGAATCCAACATTATGTCTCTAAGTTTCTGTCCACCGCACGCTCTTCTCCAATGCACGTCCGGTGTTC
CGTCCGGTAGCAACACCGAATGGACGAATGCAAAATCGACAGCAGGAGGTTCATCACTCGGCTCATCTACGACTGGAGGCTGGCTT
GCTGGTGCGGTGCTTATGGCTCGGATAGTTTTGGCTCTGGTGGCATTGTGTTTTGAGCGTAAGAAGGACGACTTGGGGTTACTAAG
TTTGGTTTTGTGGCTAAAGATATGATTTTGAGATAGAGAAGCTACTAAGCCTGAACCATTCAACTGTACACTTCCCATATTCTTGC
TCTCTTTCTTAAAAGTAATCAAAAGAATCCAAAGGGTTGGGACTTTTAATTCGGATAATGTTTTATATCACTTCTTGAGGTTACTA
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885131 hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp. lyrata]9922e-105
NP_188246 NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]9643e-102
XP_002515998 electron carrier, putative [Ricinus communis]6444e-065
XP_002284206 PREDICTED: hypothetical protein [Vitis vinifera]6014e-060
XP_002299725 predicted protein [Populus trichocarpa]5989e-060

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LU21 At3g162409642e-102
B9RQH9 Electron carrier, putative6443e-065
A9PFE5 Predicted protein5986e-060
C6T195 Putative uncharacterized protein5531e-054
C5X963 Putative uncharacterized protein Sb02g0335905305e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G16250.1 NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding9651e-104
AT4G32590.1 ferredoxin-related2946e-027
AT4G32590.3 ferredoxin-related2525e-022
AT4G32590.4 ferredoxin-related1702e-012
AT4G32590.2 ferredoxin-related1128e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
86  30%
 
104  20%
 
92  10%
 
63  15%
 
125  25%

Unigene MembersMember information