Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19559

FASTA Sequence
Unigene ID: UN19559Length: 590  SNP
CGGGCATAGAGATTTATTTAAGTATTCTATAATGAAATGAATATAGTCGATTTAAAATTGACACATACTTTAGATAAACTGAAAAA
CACATCTTGATGATACAAAAACATAAGAGTTAACAGGCAAAGATGAGAAACAATCGTATACGAGAGCTAAAACAGATGAAATCAAA
GATCCAACGAAGTACAAAACTTGTAAAGCTTAAGACGAGACCAGCTTAGAAAAGTGATGTTCCCTTGCCCTTCTTGTCTCCACCGA
TCTCAAAATGCTTGCACCTCTTGATGGAGTGCTGAGAAAAGTGCTTGCAGGTTTGGCACTGAAGCCTCAAGACAATCTTCTTAGTG
GTCTTAGCCTTCTTGTGGAAGACAGGCTTAGTCTGACCACCGTAACCGGATTGCTTACGGTCATAACGACGCTTCCCTTGAGCAGC
GAGACTGTCTTTACCCTTCTTGTATTGGGTAACCTTGTGCAAGGTATGCTTCTTGCATTCCTTGTTCTTGCAGTATGTCTTCTTTG
TCTTCGGAATGTTCACCATTTTCGCTCCTCTGATCTATCTCCGGTGAAGCTTGTGTGCCGTCGTCTTCTGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK94425 60S ribosomal protein L144 [Brassica rapa subsp. pekinensis]5922e-059
XP_002306382 predicted protein [Populus trichocarpa]5563e-055
XP_002310076 predicted protein [Populus trichocarpa]5554e-055
ACG24328 60S ribosomal protein L44 [Zea mays]5554e-055
NP_001146988 60S ribosomal protein L44 [Zea mays]5554e-055

Swiss-Prot top hits (Blast detail)Scoree value
O23290 60S ribosomal protein L36a5507e-056
Q96499 60S ribosomal protein L445444e-055
A8PCG3 60S ribosomal protein L444639e-046
Q9UWE4 60S ribosomal protein L444639e-046
O59870 60S ribosomal protein L444639e-046

TrEMBL top hits (Blast detail)Scoree value
Q94ER6 60S ribosomal protein L144 (Fragment)5921e-059
A9P9G6 Predicted protein5562e-055
A9PD13 Predicted protein5553e-055
B6SHJ5 60S ribosomal protein L445553e-055
B6SIY6 60S ribosomal protein L445553e-055

Arabidopsis top hits (Blast detail)Scoree value
AT3G23390.1 60S ribosomal protein L36a/L44 (RPL36aA)5515e-057
AT4G14320.1 60S ribosomal protein L36a/L44 (RPL36aB)5515e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
610  50%
 
114  20%
 
123  15%
 
72  10%
 
211  5%

Unigene MembersMember information