Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19566

FASTA Sequence
Unigene ID: UN19566Length: 814 SSR 
AACTTCTTTAAAACCCCTGCATAGTAAAAATGATACAAGCTGAATTAAGATGATAACGACACACTTGCACACAACTCAATAATGTC
AACAAACAGTACAACTACAACATATTCCCAAACTCACAGATCTTTTTATTTTATTTTGCAGCTACAGATAGATCAAAGATAGTGAA
TCTTGATTTGGAAACAAAACAAAAGTACAGAGAGAGTCTTCAGGCCGCGGTAAGATCTTCTTCTACAAATTTGGCAAACTCTTCCC
TTGATCTCCCATCTGGATTCTTCTTCCATTCGATGAACTTCTCTGACGCCTTTATGAACTTTTCCATGTGAAGTTTCTTCCATTCC
TCGAAATCCCATTCTCCATACATATCAGGATCATCTTTGTTAGCCCATACAAAGGTTTCTACTTGCATCTTCTCGGATGTTTCAGT
CAATATAACTTCAACAGTCTTCCTCACATAGTCATCTCCTTCAATCATATCTAAATTCTCTAGCTGAGCATCTGTTAGTCCAGTTA
GTATCTTTCCATTGATAAGTCCGTTCTCAGAAGGAGAAATACATGGATGCAAACGCCCTTTGAGCCTATTTAGATGATAGCCGTGG
AGTTGAGCAGAGACGGTGACTGGATTACATTCGAGAATCAAGTTGACGACGGATGGTTCTTGGAAACTGCCGTAGACAAAGACATT
GTGCGACGGAGATTGATCAGAACTAGTCATCGTTCTTGAATGAAAGCTATGTGAGAGAGAGAGAGAGAGTTGGTGCTATGTTTCTT
TATTTATTCCCTCTCACTATCACCATCATAATCACGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34156 unnamed protein product [Thellungiella halophila]7871e-081
XP_002877143 predicted protein [Arabidopsis lyrata subsp. lyrata]7709e-080
XP_002877144 hypothetical protein ARALYDRAFT_905179 [Arabidopsis lyrata subsp. lyrata]7663e-079
NP_189535 protein AIG2 [Arabidopsis thaliana]7644e-079
NP_566840 AIG2-like protein [Arabidopsis thaliana]7538e-078

Swiss-Prot top hits (Blast detail)Scoree value
P54121 Protein AIG27642e-080
Q9FIX2 AIG2-like protein4892e-048

TrEMBL top hits (Blast detail)Scoree value
Q9MBH2 AIG2 protein-like7536e-078
Q9MBH1 AIG2 protein-like5027e-049
Q9FIX1 AIG2-like protein5011e-048
Q8LBI2 AIG2-like protein4982e-048
A2RVP6 At5g397204892e-047

Arabidopsis top hits (Blast detail)Scoree value
AT3G28930.1 AIG2 (AVRRPT2-INDUCED GENE 2)7642e-081
AT3G28940.1 avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative7533e-080
AT3G28950.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related5024e-051
AT5G39730.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related5016e-051
AT5G39720.1 AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)4891e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  20%
 
119  60%
 
73  20%

Unigene MembersMember information